Gene Snas_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5127 
Symbol 
ID8886335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5446869 
End bp5448005 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content64% 
IMG OID 
ProductEndonuclease I 
Protein accessionYP_003513855 
Protein GI291302577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.745225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCA CACTCCGCCC TGCCCTGCTC ACAGCGGCTC TACTCACCGG CTCCTACCTC 
CTCCTGGCCG CCCCAGCGTC CGCCCACGAA CCCACCGCCA TCCCCGACGG CTACTACGAC
GCCGTCGACG GCCTCACCGG CGAAGCCCTC AAGTCCGGCC TCAACGACAT CATCAGCGGC
AACGACCAAC TCTCCTACAG CGAAGCCAAA GAGGCCCTCA AGGAAACCGA CGCCGACCCG
TCCGACCCCA GCAAAGTCGT CCTCATCTAC AACGGCACCT CCGTCCCCGC GTCCAGCAGC
GACTGGAACC GCGAACACGT ATGGGCCAAG AGCCACGGCG ACTTCGGCAC CACCATCGGA
CCCGGCACCG ACATCCACCA CCTCCGCCCC GCCAACCCGG TCGTCAACTC CACCCGCAAC
AACCTCGACT TCGACAACGG CGGCAAAGAA GTCACCCAAG CCCCGGGCAA CTTCTACGAC
TCCGACTCCT TCGAACCCCG CGACGCCGAC AAGGGCGACG TGGCCCGCAT GATCCTCTAC
ATGGCGGTCC GCTACGAAGG CGAAGACGCC TTCGCCAACC TCGAACCCAA CGACAAGGTC
GAGAACAACT CCGCCCCGTT CCACGGCCGC CTGTCCGTCC TCAAAGAATG GTCGGCCCAA
GACCCACCCT CAACCTTCGA GAAGAACCGC AACGAGGTCA TCTACTCCAA GTACCAACAC
AACCGCAACC CCTTCATCGA CCACCCCGAA TGGGTCAACA CCATCTGGGG CGGCACCCCC
ACCGACCCAC CCACCTGCGA CCCGGCCACC AACGCCAACC CCGTCACGTT GCGGGACAAC
GCCATCGTCA CCAGCGACAT CACCGTCTCC GGCTGCACCG GCAACGCCTC AACCACCAGC
CAAACAACCG TCGACATCAC CCACCCCAAC CGAGGCGAAC TGTCGATCTA CCTCTACGCC
CCCGACGGCA CCTACTACGT CCTCAAACGC ACCGGAGACT CCGGCGCCGA CCTCAAACAC
ACCTACACGG TCGACCTCGA CACCGAACCG GCCAACGGAA CCTGGCGCCT GAGCGTCAAG
GACTACGCGA CGGGCAACAC CGGCACCATC AACTCCTGGA CCCTCAACCT CGGTTAA
 
Protein sequence
MRPTLRPALL TAALLTGSYL LLAAPASAHE PTAIPDGYYD AVDGLTGEAL KSGLNDIISG 
NDQLSYSEAK EALKETDADP SDPSKVVLIY NGTSVPASSS DWNREHVWAK SHGDFGTTIG
PGTDIHHLRP ANPVVNSTRN NLDFDNGGKE VTQAPGNFYD SDSFEPRDAD KGDVARMILY
MAVRYEGEDA FANLEPNDKV ENNSAPFHGR LSVLKEWSAQ DPPSTFEKNR NEVIYSKYQH
NRNPFIDHPE WVNTIWGGTP TDPPTCDPAT NANPVTLRDN AIVTSDITVS GCTGNASTTS
QTTVDITHPN RGELSIYLYA PDGTYYVLKR TGDSGADLKH TYTVDLDTEP ANGTWRLSVK
DYATGNTGTI NSWTLNLG