| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5112 |
|---|
| Symbol | |
|---|
| ID | 8886320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5428656 |
|---|
| End bp | 5431133 |
|---|
| Gene Length | 2478 bp |
|---|
| Protein Length | 825 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase |
|---|
| Protein accession | YP_003513840 |
|---|
| Protein GI | 291302562 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.191033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.121153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACAG AAGAAAGCAC CCGCACGCCC GAGGTGGCGG CGCTGGGTGA ACACACCGCG
ACCGCGGTAA TCGACAACGG GGCGCACGGG AAGCGCGAGA TCACCTTCTC CACCGGACGC
CTCGCCAAGC AGGCCGCCGG TAGCGTCCTG GTGCAGCTGG GCGACACGGT CGTGCTGTCC
ACGACCGCCG CCGGCAAGCA CCCCAAGGAG CACTTCGACT TCTTCCCGCT GACGGTGGAC
GTCGAGGAGC GGATGTACGC CGCCGGACGC ATTCCCGGCT CGTTCTTCCG CCGCGAGGGC
CGTCCCAGCG AGGACGCCAT CCTCACCTGC CGTCTCATCG ACCGCGGCCT GCGTCCCAGC
TTCATCAAGG GGCTGCGCAA CGAGGTCCAG GTCATCGAGA CCGTGCTGGC CCTCGACGAG
GCCCACCCGT ACGACGTGGT GGCCATGAAC GGCGCCTCCG CCTCGACCGC GCTGTCGGGG
CTGCCGTGCC AGGGCCCGCT GGGCTCGACC CGCGTCGCCA ACATCAACGG TGAGTGGGTC
GCGTTCCCGA CCCTGGAGCA GCTGGAGACC GCGACCTTCG ACATGGTCGT CACCGGCCGG
GTCGTCGAGG GTGGCGACGT GGCCATCATG ATGGTCGAGG CCGAGGCCAC CGACAAGGCC
GTCGAGCTGA TCGGCGGCGG TTCGGTCGCG CCGACCGAGG AGGTCGTGGC CGCGGGCCTG
GAGGCCGCCA AGCCGGTCAT CTCCGAGCTG TGCCGCGCCC AGCGTGAGCT GGCGGGCGTC
GCGGCCAAAC CGGCCGTGGA GTTCCCGCTG TTCCCCGAGT ACGGCGACGA CGTCTTCGCC
CGGGTCGAGG CCGAGGTCGG CACCGAGCTG GCCGCCGGGC TCACCATCGC CGACAAGCAG
GAGCGCGAGG CCGAGCTCGA CCGGATCAAG GCCGCGCTGG TCGAGAAGAT CGCCGGTGAG
TTCGAAGAGC GCGAGGGCGA GATCGGTTCG GCGCTGCGGT CGCTGACCAA GAAGCTGGTG
CGCCGCCGGG TCCTGACCGA GGGCGTGCGC ATCGACGGTC GCGGCACCCG CGACATCCGG
CCGCTGTCGG CCGAGGTCAA GATCCTGCCG CGAGTGCACG GATCGGCGCT GTTCGAGCGC
GGCGAGACCC AGATCATGGG TGTCACCACG CTGAACATGC TGCGCATGGA GCAGGCCATC
GACACGCTGT CGCCGGTCAG CAAGAAGCGC TACATGCACA ACTACAACTT CCCGCCGTAC
TCCACCGGTG AGACCGGCCG CGTGGGTTCG CCCAAGCGCC GCGAGATCGG CCACGGCGCG
CTGGCGGAGC GGGCCATCGT GCCGGTGCTG CCCAGCCGCG AGGAGTTCCC GTACGCGATC
CGGCAGGTGT CGGAGGCGCT GGGCTCCAAC GGTTCCACGT CGATGGGTTC GGTGTGTGCC
TCGACCATGA GCCTGATGGC GGCCGGTGTG CCGCTGAAGG CCCCGGTCGC CGGTATCGCC
ATGGGCCTCA TCTCCGACGA GGTGGACGGC AAGACCGAGT ACGTCACCAT CACCGACATC
CTCGGTGCCG AGGACGCGTT CGGCGACATG GACTTCAAGG TCGCCGGTAC CCGCAACTTC
GTCACCGCGC TCCAGCTGGA CACCAAACTG GACGGTATCC CGTCCGACGT GCTGGCCGGT
GCGCTGTCGC AGGCGTACGA CGCCCGCCAG GCCATCATGG ACGTGATGGC CGAGGCGATC
GCGGAGCCGA GCGCCATGGC CGAGACCGCG CCGCGCGTCA CCACCGTCAA GGTCCCGGTC
GACAAGATCG GCATGGTCAT CGGCCCGAAG GGTCAGACCA TCAACTCGAT CACCGAGGAG
ACCGGCGCCG ACATCTCGAT CGAGGACGAC GGCACCATCT ACATCGGTGC GACCACCGGC
CCGGCCGCCG AGGCCGCGGT CGCGATGATC AACGGCATCG CCAACCCGAC GCTGCCGAAC
GTCGGCGACC GGTTCCTGGG CACCGTGGTC AAGACCGCCG CCTTCGGCGC CTTCATCTCG
CTGGTGCCCG GCCGCGACGG TCTGCTGCAC ATCTCCAAGA TCGGTGACGG CAAGCGGATC
GACAAGGTCG AGGACGTCCT CAACGTCGGC GACAAGATCG AGGTCGAGAT CGCCGATGTG
GACGGTCGCG GCAAGATCTA CCTGGACAAG GTCTACCCCG AAGGCCAGGA GCCGCCGAAG
CGTCCCTCCG GCGGCGACCG TGGCGGACGC GAGGGCGACC GTGGCCGTGG CCGTGAGGGC
GGCGGCCGTG ACCGTGGCCC GCGTGGCGAC CGGGGCGACC GTGGACCCCG CGGGGACCGT
GGCGACCGCG GTGACCGTGG TCCGCGCGAG TCCAAGCCCG CCGAGGCCGA GGTCGTCTCG
GAGTCGGCCG AGGGCGACGC CGGTTCGGGC GAGCCCCGGC AGCGTCGGCG CCGCCAGCGG
CGCACCGAGG AAGACTAA
|
|---|
| Protein sequence | MSTEESTRTP EVAALGEHTA TAVIDNGAHG KREITFSTGR LAKQAAGSVL VQLGDTVVLS
TTAAGKHPKE HFDFFPLTVD VEERMYAAGR IPGSFFRREG RPSEDAILTC RLIDRGLRPS
FIKGLRNEVQ VIETVLALDE AHPYDVVAMN GASASTALSG LPCQGPLGST RVANINGEWV
AFPTLEQLET ATFDMVVTGR VVEGGDVAIM MVEAEATDKA VELIGGGSVA PTEEVVAAGL
EAAKPVISEL CRAQRELAGV AAKPAVEFPL FPEYGDDVFA RVEAEVGTEL AAGLTIADKQ
EREAELDRIK AALVEKIAGE FEEREGEIGS ALRSLTKKLV RRRVLTEGVR IDGRGTRDIR
PLSAEVKILP RVHGSALFER GETQIMGVTT LNMLRMEQAI DTLSPVSKKR YMHNYNFPPY
STGETGRVGS PKRREIGHGA LAERAIVPVL PSREEFPYAI RQVSEALGSN GSTSMGSVCA
STMSLMAAGV PLKAPVAGIA MGLISDEVDG KTEYVTITDI LGAEDAFGDM DFKVAGTRNF
VTALQLDTKL DGIPSDVLAG ALSQAYDARQ AIMDVMAEAI AEPSAMAETA PRVTTVKVPV
DKIGMVIGPK GQTINSITEE TGADISIEDD GTIYIGATTG PAAEAAVAMI NGIANPTLPN
VGDRFLGTVV KTAAFGAFIS LVPGRDGLLH ISKIGDGKRI DKVEDVLNVG DKIEVEIADV
DGRGKIYLDK VYPEGQEPPK RPSGGDRGGR EGDRGRGREG GGRDRGPRGD RGDRGPRGDR
GDRGDRGPRE SKPAEAEVVS ESAEGDAGSG EPRQRRRRQR RTEED
|
|---|
| |