Gene Snas_5110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5110 
Symbol 
ID8886318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5426435 
End bp5427196 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID 
Productdihydrodipicolinate reductase 
Protein accessionYP_003513838 
Protein GI291302560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.188253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.135082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG TCGCCCCCGA CGCCATCCGC GTGGGTGTCC TGGGCGCTCG CGGCCGGATG 
GGCACCGAGG TGTGCAAGGC CGTCGACGCG GCGCCGGACA TGGAACTGGT GGCGATGGTC
GAGGTGGGGG ACTGGCTGTT CAACATGTCC GACGCCGGTG CCGAGGTCGT CATCGACTTC
ACCCGCCCCG AGGTCGTCAT GGACAACCTG CACTGGTGCA TCGACCAGGG CATTCACACC
GTCGTCGGCA CCACCGGCTT CACACCCGAG CGGATCAAAC GGGTGGAGCA CTGGCTGTCG
GCCAAACCCG GACTCGGTTC GATCATCGCC CCCAACTTCG GGATCGGTGC GGTGCTGATG
ATGCGGTTCG CCCAGGCCGC GGCCAAGCAC TTCGAGTCGG CCGAGGTGGT GGAGTTCCAC
CACCCCAACA AGGTCGACGC CCCCAGCGGC ACCGCCACCC GCACCGCCGA ACTCATCGCC
GCGGCCCGCA AGGAAGCCGG GCTGGGCGCC TCACCCGACG CCACCACCCA GGCCCTGGAC
GGGGCCCGTG GCGCCGACGT CGAGGGCGTG AAGGTGCACG CGGTGCGCTC GGCGGGCATG
ATCGCCCACC AGGAGGTCAT CCTGGGCGGT GCCGGTGAGA CGCTGACGCT GCGGCACGAC
TCGGTGGACC GCGCCTCGTT CATGCCCGGC GTGCTGCTGG CCACCCGCGC GGTGCGCTCG
AAGCCGGGCC TGACGGTTGG CATCGACTCG CTGCTGGACT GA
 
Protein sequence
MSEVAPDAIR VGVLGARGRM GTEVCKAVDA APDMELVAMV EVGDWLFNMS DAGAEVVIDF 
TRPEVVMDNL HWCIDQGIHT VVGTTGFTPE RIKRVEHWLS AKPGLGSIIA PNFGIGAVLM
MRFAQAAAKH FESAEVVEFH HPNKVDAPSG TATRTAELIA AARKEAGLGA SPDATTQALD
GARGADVEGV KVHAVRSAGM IAHQEVILGG AGETLTLRHD SVDRASFMPG VLLATRAVRS
KPGLTVGIDS LLD