Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5094 |
Symbol | |
ID | 8886302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5410773 |
End bp | 5411705 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Shikimate dehydrogenase substrate binding domain-containing protein |
Protein accession | YP_003513822 |
Protein GI | 291302544 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0348844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCTC ACGACGGATA CCTCATCGGC CTCATCGGGT CGGGTATCGG CCCCTCGCTG AGCCCGGCGC TGCACGAACG CGAGGCCGCC GAGCTGGGGC TGCGCTACCT GTACCGGCGC CTCGACCTCG CCGCGACGGG GCGGGGGCCT GGGGCGTGCG TCGAGGTGCT GGCCGCCGCC CGGCTGGCCG GATACGACGG GCTCAACATC ACCCACCCGT GCAAGCAACT GGTCATCCCC CACCTCGACG AACTGTCCGC CGACGCGGCC GCGCTCGGGG CGGTCAACAC GATCGACCTG TCGGGCGGCC GCGCCGTGGG GCACAACACC GACTGGTCGG GCTTCAGCCG GGCGTTCACC CTCGGCCTGC CCGAAGCCGC CATCGAGCGC GTGGTGGTGC TCGGCGCGGG CGGAGCCGGA GCCGCCGTCG CCCACGCGCT GCTGACGCTG GGCGCCAACC GGATCGAGCT GTTCGACCGC GTGGCCGAGC GCAGCCACGA GCTGGCCGCC AAGCTGTCCA ACCACTTTGG AGCGGGCCGA GTAGTGGCGG GGCGCTTGGG CGGCGACGGC GCGCTGGCCA CGGCTCCGAC GGCTGGGCAG CCGTTCGGCG AAGCCGACGG CTTGGCCGCC GCGCTCGCCG TCGCCGACGG CTTGGTTCAC GCCACTCCCA CGGGGATGAG CGCTCATCCG GGGTTGCCGC TGTCCGTCGA GCTGCTGCGT CCTCAGTGCT GGGTCGCGGA GGTTGTGTAC CGGCCGCTTC AGACCCCGCT GCTGGCCGCC GCTCGGGCGC GCGGCTGTCG GGTGCTCGAC GGCGGCCGCA TGGCGGTGTT CCAGGCCGCC GAGTCCTTCC GTCTGTTCAC CGGCGCCGAG CCCGACCCCG ATCGGATGTC GCGCCACTTC CAGGACCTGA TCGGAGCCGA AAGCCATGCC TGA
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Protein sequence | MTAHDGYLIG LIGSGIGPSL SPALHEREAA ELGLRYLYRR LDLAATGRGP GACVEVLAAA RLAGYDGLNI THPCKQLVIP HLDELSADAA ALGAVNTIDL SGGRAVGHNT DWSGFSRAFT LGLPEAAIER VVVLGAGGAG AAVAHALLTL GANRIELFDR VAERSHELAA KLSNHFGAGR VVAGRLGGDG ALATAPTAGQ PFGEADGLAA ALAVADGLVH ATPTGMSAHP GLPLSVELLR PQCWVAEVVY RPLQTPLLAA ARARGCRVLD GGRMAVFQAA ESFRLFTGAE PDPDRMSRHF QDLIGAESHA
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