| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5029 |
|---|
| Symbol | |
|---|
| ID | 8886236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5338682 |
|---|
| End bp | 5340178 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003513759 |
|---|
| Protein GI | 291302481 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.220983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGC TACGCGGAGC CACCAACCCC GCCGACGTCG ACGTCCGGAC ACCGACACTG
CGATCGCGGC TGAGCCGCTA CGGCGGTCTG CTCGGCGCGA TCACCGTCGC GGTGTCGTCC
TTTCTGGCCG GAGCCCGCCA GACCGGCCAG CCCGCACCGC TGGACTGGGA CCGGCTGGCC
ACCGACTCCC GCTACGCCCT GGGCTGCGCC GCCTGGCTCG CGGGCATAGC GGTACTGCTG
GCGGCGTGGT GGCTGGCCCG GGGCATCGGC ACCACCCGCT GGATGCTCGT GACGTCAGCA
CTGTGGACGA TCCCGCTGTT GGTCAGCGCG CCGATCGGCA GCCGCGACGT GTACGCGTAC
GCCAACCAGG GCGAGCTGTA CGCCGCGGGC CTGAACCCGT ACGAGGTCGG CCCGGCGGCG
CTGCCGACCC AGTGGCTGAA CCAGATGGAC GACTACTGGT TCACCGAACC CGCGCCGTAC
GGGCCGCTGT TCCTGCTGCT GGCCGCCGCC ATCGCGTCGC TGTCGGCGCC AAGCCTGACC
GTCGCGGTGG TGCTGTTCCG GCTGACGGCG CTGGCGGGAC TGCTGATCTG CGTGTACCTG
ATCCCCCGAC TGGCGAAGCA CTGTGGAATA TCGCCGTCGG CGGCGCTGTG GCTCGCGCTG
GCCTGCCCGC TGACCCTGGT GCACCTCGTC GGCGGAATCC ACAATGAAGC GTTGATGATG
GCGGGTGTGC TGGCCGGGTT CCTGTTCGCG ATCCGCCGAC GGCTGGTGTG GTGCGGGGTC
GCGCTGGCGC TGGCCGTCGC GATCAAGGCG ACCGCGTTGG TGGCGGTGCC GTTCGCGATC
CTGCTGCTGG CCCGCCGCGC GGACTTCAAG GCGATCCTCG ACAAAGCCTG GCGGCTGGGC
GCGGTCGCAC TGGCGGTGTT CGCCGTCGCC ACCCTCGCCT CCGGTCTGGG CCTGGGCTGG
GTGACAGCGC TGGGGGCGTC CAGCAAGTCG ATCTCGTGGC TGTCGGTGCC CACGGGCGTG
GGCATCACGT GCGCCAAGAT CATGTTCAAC ATCGGGGCCG ACCACCTCGC GGAGTACATG
GTCCCGCTGT GGCGGATCGT GGGCCTGGCA GCGGCGGCGG TCGCGACGGT CGCGCTGTGG
TGGCGGGCCC GGGGCGCGAC ACCCGCGACG GTGCTGGCCG CCGCGGGCTG GGCCTTCGCC
GCAGTGGCGA TCCTGGGGCC GATCCTGTTG TCCTGGTACG CGTTGCCGCC GCTGTTGCTG
CTGGCCTGTG CCGAACCCCG GCGCCGCGTC CTCACCGCGA TCGCGGCCGT GGCCACCGCG
CTGACCCTGT TCATCTTCCC CGACGGCCAC AACGTCGCCG CCGAACAGTT CTTCAAACCC
GGCCTGCTCA TCGACGTGGT CGCGGCGGTG GCGCTGACCG TACTGGCCTG GCGCTGGTGG
CGCGCCCCGC GTGCGGCGAC GGCCGTCGCG GAACCCGCCA CGACGGCCGT CTCCTAG
|
|---|
| Protein sequence | MTALRGATNP ADVDVRTPTL RSRLSRYGGL LGAITVAVSS FLAGARQTGQ PAPLDWDRLA
TDSRYALGCA AWLAGIAVLL AAWWLARGIG TTRWMLVTSA LWTIPLLVSA PIGSRDVYAY
ANQGELYAAG LNPYEVGPAA LPTQWLNQMD DYWFTEPAPY GPLFLLLAAA IASLSAPSLT
VAVVLFRLTA LAGLLICVYL IPRLAKHCGI SPSAALWLAL ACPLTLVHLV GGIHNEALMM
AGVLAGFLFA IRRRLVWCGV ALALAVAIKA TALVAVPFAI LLLARRADFK AILDKAWRLG
AVALAVFAVA TLASGLGLGW VTALGASSKS ISWLSVPTGV GITCAKIMFN IGADHLAEYM
VPLWRIVGLA AAAVATVALW WRARGATPAT VLAAAGWAFA AVAILGPILL SWYALPPLLL
LACAEPRRRV LTAIAAVATA LTLFIFPDGH NVAAEQFFKP GLLIDVVAAV ALTVLAWRWW
RAPRAATAVA EPATTAVS
|
|---|
| |