| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5019 |
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| Symbol | |
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| ID | 8886226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5326908 |
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| End bp | 5329658 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003513749 |
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| Protein GI | 291302471 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.385321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGATCA TCGGACGTGA CGAGATCCTC GGCCCGGCCG TGGCCGCGCT GCGGGATCGG
AACAGCCTGC TGCTGTACGG ACCGTCCGGG ATGGGCAAGA CCACGCTGCT GGACCGGCTG
AGCGACACGG CTTCGCGGTG GGGGTTCCGG GTGCTGCGCG CGGCCCCGGC ACACGTGGAG
AGCCAGTTGC CGCACCTGGT CCTCATCGAT CTGTTCGCCG AGCTCGTGCC CGAGGCGCAC
GGCATGCCCG CCCAGTTGCG GCAGGCCCTG ACCGGGGTGC TGCTGCGGGG TTCGCGGGCC
GCCAACCCGC CCGACGAGTT GACCGTGCGG GTCGCGGTGC TCGATCTGCT GCGCCGGGCC
TGCGAGGAGC GGCCGGTGCT GTTGGTCATC GACGACGTCC AGTGGGTGGA CGAGGCCAGC
CGTGAGGTGC TCGCGTTCGT GGCGCGGCGG CTCGGCGACA CCGCGATGCG GGTGCTGGCG
GCCGAACGCG TCGACGGGCA CGATCCGACG CGGCTGGCGC TGTGCCCCGA ACCGGTCACC
GCGATCGAGG TGACCCCGTT GGCGCCGGGC GACATCGCGG CGCTGCTGGA CACGGTGGTC
GACGGGCCGC TGTCGTCGCG GGTGGTGCGG CGGATCGCCG ACGCCAGCGG CGGCAATCCG
TTGTACGCGC TGGAGTTGGG GCGGCAGCTG GATCGCGATG AGGGCGAACC GGCCGAGTTC
GATCCGCTGC CGGTGTCGCG TCGGCTGCGC ACCCTGATGG CGGGGCGACT GGCCGGGCTC
GACGAACCCA CGCGCTGGGC GATGCTGCTG GCCGCGTTGG TGGCGCGGCC GTCGCTGGAC
CTGTTGGCCG CCTGTGACGC GCTGCCCGCC GACGACCTGG AATCGGCCGA GACCGCCGGG
ATCATCACCG TCACCGGCGA CGGCGGCATC GCGTTCACCC ACCCGCTGCT GCGGGAACTG
GTCAACGCCG ATGCCACCAC GGCCTCGCGT CGCAAGGCCC ACTCGGTGCT GGCCGCGGCG
GTCGACGAAC CGGTGGCGCG CGCCGTCCAC CTGGCGTTGG GCAGTCCGGT CGCGGACGAG
GAGATCGCCG CCTTGGCCGC CGACGCCGCC GAGGTGGCCG CGCACCGGGG CGCCCCGGGC
AGCGCCGCCG ACCTGGCGCA GCTGGCGGTG CGGCGCACCC CGCCGTGCGA GACCGACGCC
GCCGCCGCGC GGTCGCTGGC CGCGGCCCGG TACGCGCAGA CCGCCGGTCG GGTCCCCGAG
GCGACCGAGT CGGCGCGCTC GGCACTGGAA TCCGGTGCGG CGTCGGTGCG GGTGGAGGCG
CGGCTGCTGC TCATCGACCT GGCGGGCCAG GATCTCGCCG AGGCCGACGC GCACCTGGTC
GCCGCCCGAG TCGACGCGGC GGGCGACACC GCGCTGCAGG CGAAGGTCGC GCTGTACACC
GGCACCATCG ACTATTTCGA ACGGCGCTAC GACCACGCCG CCGTGGAGGT GTCGCGGGCC
GAGGAACTGG CGCACGAGGT CGGCGACGTG GATCTGGCGA TCCAGGCGCT GAACCTGCGC
GCCTGCCTGC CCGCGTCCGA GCAGAGTGGC GAGGCCGACA AGCAGCGCGA GGCGGCGTTC
CGGCTCGCGG AGGGCCGCCC GGTCAGCGCC TCCACGATCG AGGCCCGGCA GATGTGGGCG
ATGAACGCGC TGTTCCGGGG CGACACGACC GTCGCGGTGC GGGGCATCTC GCGACTGGAG
GCCGACGTGC GCGACCACGG CCGCATCGGG GATCTCATGT CGGTGTTGCT GTCCAGCAGC
TCGATCCACG TGCGATCCGG CGACGGTCCC GCCGGGCTGC GCGCCGGACG CGAGTGCGCG
CGGCTGTTCG AGGACGCCGG GGCGCCCGGC CCCGGACTGG TGTCCGCCGC GCAGGCCGAG
TGGTGCGCCG GTACGCCCGA GCGCGCGCTG GAGGCCGCCG CCCGCGCGAT CGCCGTCAGC
CAGGCCGTCA ACGACGACGA ATGGCTGGAG GTCGGCTTCG CGTACCAGGG ACAGGCGCTG
CTGCTGGCCG GTGACGTGGC CGCCGCGGCC GAGGCGTTCA ACCGGGCCGC GCGGCTACAG
ACGCTCAGCC AGCACGGCGA CCCCGCGATC ATCCCCTGGA ACGCCGACCA CGCCACGGCT
TTGGTGGCCG CCGGTGACCT GGACGCCGCC GCGACGGTCC TGGACGACCT GACCGCGCGC
GCCTGCCGTT TCGAGCGGCT GGTCGTGCTG TTGGGCGCGG CCCGGGCCAG GGCGCTGTAC
CTGGCGGCGC GCGGCGAACC GGCACGCGCC GCGGAAGGGC TGGCGGACGC GCTGCGCGAG
TACTCCGCCC GTTCCTACCC GATCGACGTC GCGCGCGCCG AGCTGACGCT GGGACGGTTG
CACCGTCGGA TGCGGCACCG CTCCAAGGCG CGCCGGGCCT TCGCCCGGGC CGTCGAGCTG
ACCACCGCGA TCGGCGCCGC GCCGTGGCTG GCGCTGGCCC GTGGCGAACT CGCGCGGCTG
GACAGCGGCG CGGCCCCCGC CCGGGACCTC AGCGACGCCG AGCAGCGCAT CGTCGACCTG
GTCGCCGAGG GCGCCACCAA CCGCGACATC GGCACCGCGC TGTTCCTGTC GGTCAAGGCG
GTGGAGGCGC GACTGTCGCG GCTGTACCGC CGCTTCGGCG TCCGCAACCG GGCCGGGCTG
CTGTCCAAGC TGGGGGAGCG CGGCGGCGGG CACGCGTCCG GCTCAGACTG A
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| Protein sequence | MGIIGRDEIL GPAVAALRDR NSLLLYGPSG MGKTTLLDRL SDTASRWGFR VLRAAPAHVE
SQLPHLVLID LFAELVPEAH GMPAQLRQAL TGVLLRGSRA ANPPDELTVR VAVLDLLRRA
CEERPVLLVI DDVQWVDEAS REVLAFVARR LGDTAMRVLA AERVDGHDPT RLALCPEPVT
AIEVTPLAPG DIAALLDTVV DGPLSSRVVR RIADASGGNP LYALELGRQL DRDEGEPAEF
DPLPVSRRLR TLMAGRLAGL DEPTRWAMLL AALVARPSLD LLAACDALPA DDLESAETAG
IITVTGDGGI AFTHPLLREL VNADATTASR RKAHSVLAAA VDEPVARAVH LALGSPVADE
EIAALAADAA EVAAHRGAPG SAADLAQLAV RRTPPCETDA AAARSLAAAR YAQTAGRVPE
ATESARSALE SGAASVRVEA RLLLIDLAGQ DLAEADAHLV AARVDAAGDT ALQAKVALYT
GTIDYFERRY DHAAVEVSRA EELAHEVGDV DLAIQALNLR ACLPASEQSG EADKQREAAF
RLAEGRPVSA STIEARQMWA MNALFRGDTT VAVRGISRLE ADVRDHGRIG DLMSVLLSSS
SIHVRSGDGP AGLRAGRECA RLFEDAGAPG PGLVSAAQAE WCAGTPERAL EAAARAIAVS
QAVNDDEWLE VGFAYQGQAL LLAGDVAAAA EAFNRAARLQ TLSQHGDPAI IPWNADHATA
LVAAGDLDAA ATVLDDLTAR ACRFERLVVL LGAARARALY LAARGEPARA AEGLADALRE
YSARSYPIDV ARAELTLGRL HRRMRHRSKA RRAFARAVEL TTAIGAAPWL ALARGELARL
DSGAAPARDL SDAEQRIVDL VAEGATNRDI GTALFLSVKA VEARLSRLYR RFGVRNRAGL
LSKLGERGGG HASGSD
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