Gene Snas_4857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4857 
Symbol 
ID8886064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5158723 
End bp5159523 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content65% 
IMG OID 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_003513591 
Protein GI291302313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.999319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGACA CCACGGAGCC GAAGCTGTCC GGTTCACCCA ACCTGCGCGA TCTCGGCGGG 
TACCGCACCG GTGATGGTCG GCGTACCCGG CATGGGTTGT TGTACCGGTC GGGGTCGCTG
GCCACGTTGT CCGACGCGGA CGTGGAGACC TTGGCGGGTA TGGGTTTGCG GGCGGTGGTG
GATTTCCGGT TGCCCGGTGA GGTGAGTTTC GGGGGTGCCG ATCGGCTGCC CGAGGGTTTG
ACGCCGGTGT CGTTGCCCGT GGGCGGTGGC AGTTTGGACG GGTTCTACTC GTTGGCCAAG
TCGGGTGACT GGGAGTTGAT CAACCGGGCG CTGGGGGATG GCAAGGCCCA TCGGTCCATG
ATCGACGTCT ATCGGGGTTT CGTGTCCAAG GACGACGATC GGGCCGGGTT CGCCGCCGCT
CTGCGGCGGA TCACCGAGGG TGACGCGTTG CCGTTGTTGT TCCACTGCAC CGCCGGGAAG
GACCGGACCG GGTGGTTGGC CGCGATCGTG TTGAAGCTCG TCGGGGTGAC CCGGGTGGAG
ATCTTCGATG ACTTTCTGTT GTCCGACTTG TATTTCCTGC CCTCGGCCAT CGCTCTGATG
GAGGGTTTGG GGGTGTCGCG GGTGGAGGCC CAAGTGTTCC GGCCGTTGTT GTCGCAGGAT
CCGAAGTACC TGGAGGCCGC CTTCGCTGAG GCGGAGGGGC GGTACGGGTC GTTCGAGGGT
TTTGTCCACA AGGGTTTGGG TGTTGGGCCG GAAGCCGTGG AGCGGTTGCG TTCTCGGTTG
CTGGAGCCGG ATTCGGCGTA A
 
Protein sequence
MSDTTEPKLS GSPNLRDLGG YRTGDGRRTR HGLLYRSGSL ATLSDADVET LAGMGLRAVV 
DFRLPGEVSF GGADRLPEGL TPVSLPVGGG SLDGFYSLAK SGDWELINRA LGDGKAHRSM
IDVYRGFVSK DDDRAGFAAA LRRITEGDAL PLLFHCTAGK DRTGWLAAIV LKLVGVTRVE
IFDDFLLSDL YFLPSAIALM EGLGVSRVEA QVFRPLLSQD PKYLEAAFAE AEGRYGSFEG
FVHKGLGVGP EAVERLRSRL LEPDSA