Gene Snas_4543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4543 
Symbol 
ID8885748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4845821 
End bp4846768 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content75% 
IMG OID 
Productpeptidase M56 BlaR1 
Protein accessionYP_003513281 
Protein GI291302003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0682901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCT GGGTCAGCAT CGTCGTGCTG GGAGCGCTGG CCATCGCGCT CCTGGGACCG 
ATACCCGCCA TTTTGGAACG AGCGAGTTGG CCCAGCCGCG AACCCCGGGC CGCGCTGGTG
CTGTGGCAGG CCGTGGGCCT GGCCGGCGGC GTCAGCGTCC TGGGCGTCGC GATCGCCACC
GCGCTGGCCC CGCTGGGCGA CACCCCGTGG GACGCCGCCA TGACCTGGCT GGCCACCGTG
TGGTCCGGCG ACCTCACCGG CGGCCTGGAG ACCTTCCACC TGATCCTGCT GGGCATGGCC
ATGGCCATCA CCTTCCGGCT GGCCGGGGTC ATGCCGGTGA CCATCTGGCG CACCTGGACC
GCCCGCCGTC GCCACCGCGA CCTGGTCGGC CTGGTGTCGC GCCCCTGGCC CGCCACCCGG
CCCGGCCACG GCCACGTCCT GGAACACCCG GCCGCGGCCG TCTACTGCCT GCCCGGCGGC
GTCGGCCGTG ACGCCCCCCG GGTCGTGTTC ACCACCGGTG CCCTGTCAGC CCTCGACGAC
GACGAACTGG CCGCCGTGCT CGCCCACGAG CACGCCCACC TCGTCGAACG CCACGACCTG
GTGGCGCTGC CGTTCTTCGC GTGGGTGACC GCGCTGCCGT GGTTCCCGGG CGTGCGCCGG
GCCCGCTCCA GCGTCGCGAC GCTGCTGGAG ATGGTCGCCG ACGACCGGGC CGCCACCCAG
GTGTCCCCGG CGACGCTGGC CTCGGCGCTG GCCCGCATCG GCACCGCCGC GGCCGGACGC
GCCGCCACCC CGGTGGGCGC GATCGCCGTC GACGGCGGCG GAGTCCTGCA ACGGGTGCGA
CGGCTGCTGT GCCCGCCCGA CCGATCCCGG CGCTGGCGCG TCAGCGCCTA CCTGCTGGCC
GCCGGTCTCA TCGTGGCGCC GTTCCTGGCG ATCACGACCA TCCACTGA
 
Protein sequence
MPTWVSIVVL GALAIALLGP IPAILERASW PSREPRAALV LWQAVGLAGG VSVLGVAIAT 
ALAPLGDTPW DAAMTWLATV WSGDLTGGLE TFHLILLGMA MAITFRLAGV MPVTIWRTWT
ARRRHRDLVG LVSRPWPATR PGHGHVLEHP AAAVYCLPGG VGRDAPRVVF TTGALSALDD
DELAAVLAHE HAHLVERHDL VALPFFAWVT ALPWFPGVRR ARSSVATLLE MVADDRAATQ
VSPATLASAL ARIGTAAAGR AATPVGAIAV DGGGVLQRVR RLLCPPDRSR RWRVSAYLLA
AGLIVAPFLA ITTIH