Gene Snas_4539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4539 
Symbol 
ID8885744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4844003 
End bp4844434 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content68% 
IMG OID 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_003513277 
Protein GI291301999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00924688 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGCA TGCGAGCAGT GGTACAGACC GTCAGCCAGG CTGCGGTGAC GGTGGACGAC 
GAGACGGTCG GCGAGATCAG CGACGGACTG CTGGTCCTGG TGGGGGTCAC CCACGACGAC
ACCGCCGACG ACGCCGCGGC GATGGCCCGC AAGATCTGGG AACTGCGCAT AATGGACGGC
GAGAGGTCGG CCTCCGATCT CGGCGCCCCG ATTCTCGTGG TGAGCCAGTT CACCCTCTAC
GCCGACACCC GCAAGGGCCG CCGACCCAGC TGGGGCGCCG CCGCCCCCGG ACCGGTCGCC
GAACCGCTGG TCGAAGCGGT GATCGCCAGC CTCCGCGAGC TCGGCGCCAA GGTCGAGACC
GGACGGTTCG GAGCCATGAT GTTGGTGAGC AGCATCAACG TTGGCCCGCG CACCATCATC
TTGGAACGGT AG
 
Protein sequence
MVGMRAVVQT VSQAAVTVDD ETVGEISDGL LVLVGVTHDD TADDAAAMAR KIWELRIMDG 
ERSASDLGAP ILVVSQFTLY ADTRKGRRPS WGAAAPGPVA EPLVEAVIAS LRELGAKVET
GRFGAMMLVS SINVGPRTII LER