Gene Snas_4481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4481 
Symbol 
ID8885686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4777652 
End bp4780216 
Gene Length2565 bp 
Protein Length854 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513219 
Protein GI291301941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.180518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.201948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTG CCACGTTCAA ATCGTTGCTG TCGCGCAAGG CGCGACTGTT CATGTCCGGC 
CTGGCGGTGA TCCTGGGTGT CGCGTTCATC TCCGGCACCC TGATCCTCAA CGCCTCGCTG
GGCGACTCGA TCCGCGACAT GTTCGCCACC GCGTACAAGA ACGTCGACGT CCAGGTCACC
CCCGACGCCG ACGAGTCCAA GGACAAGGTC GCCACGATCC CCGCCGACCT GGTCGACGAG
ATCAAATCCC AACCGCACGT CGACAAGGCC ACCGCGGAGG TCGCCGACGC CGCCGGCGGC
GTGCAGGTGC TCGACAAGAA CGAGAAGGTC CTGCCCCCGA CCGGTCCCCC GACCATCGGC
ACCAACTGGA CCGGCGTCAA CGACCCCATG GAGATGGCCG ACGGTTCCGG CCCCGAGGCG
TCCGACGAGG TCGCCATCAA CAAGGGACTG TCCGATGCGA CCGGTTACGA GGTCGGCGAC
ACCATGAAGC TGGTGCTGCC CAACTCCGGT GACACGAAAC CGCAGTCCTT CGAGGTCTCG
GGTGTGTTCG AGTACTCCGG CAACCGGGGT TCGCTCGGTG GCGAGTCCAC CGTCTCGTTC
ACCACCGAGA CGGCGCAGAA GATGTTGCTG GGCAAGGAGG ACGTGTTCTC CAGCGTCAAC
GTCAAGAGCG ACGGCAGTGT CTCGCAGACC GAGCTGAAGA AGCAGCTGTC GTCCGAACTG
GGCGGCGACT ACCAGATCAA GACCGGTGAC AAGCTCGCCG AGGAGTCCGC CGGGCAGCTG
TCGATCATCC TCGACTTCTT CAACTACCTG CTGTTGGGCT TCGGGACGAT CGCGTTGCTG
GTGAGCGTGT TCCTGATCAT CAACACCTTC TCGATCATCG TCGCGCAGCG CACCCGGGAG
CTGGCCCTGT TCAGGGCCAT CGGCGCCGGA CGCGGCCAGG TGACCCGATC GGTGATGCTG
GAGGCGTTCA TCATCGGCGC CCTGGCGGCC GTGGTCGGCA TGGCCGTGGG TGTGGGACTG
GGCTGGGCGG GCACCGAGGC CATGAGCGGC CTGTTCGGTG ACCTCCAGAC CACTTTGTCC
ATCCCGATGG AGGCGTGGAT CGCCGCGGCC GCGATCGGTA TCGGCATCAC GATGTTCGCG
GCGCTGCTGC CGGCGCTGCG GGCCGGGCGG ATTCCGCCGA TCGCCGCGCT GCAGGACCCG
TCCAACACGC AGCGGCCGGT GCGCTGGTTC GCCATCATCG GCGGGCTGCT GCTGGTCGGC
GGTGGTGCGC TGCTGACCGC CGCGCTGACC AAGCAGTTCG GCAAGATCGA CTCCGACGAC
ACCCGCATCG CGGTGTTCAG CGCGATCACG GTGCTGTTCC TGGGCGCCAT CATCTTCACC
CCGGTGCTGG CCCGGCCGTT GGTGTCGCTG ATCGGTTTCC TGTTCTCGTG GTCGCTGCCG
GGCAAGCTGG GCCGCCGCAA CTCGGGCCGC AACCCGAGGC GCACGGCGAT CACGGCCACC
GCGCTGATGA TCGGCATCAC TTTGGTGACC GGTGTGGGCG TCATGTTCTC CTCGGCCAAC
GCGAGCATCC AGAAGTACAT GGCCAAACAG GTCAACATGG ACTTGATGAT CTCGCCCGCG
ACGCAGGGGC AGAACCCGCC CACCTTCGAC AAGTCGGTGC TCGACGAGGC CGCCGACATC
GACGGGGTCA CCAAGGTCGT GGACGGCTAC GCCGATTCGC AGGCCACTTT GGATGGCGAA
CCGATCTACG TCCAGGCGAC GTCGAACATC AAGGACTTCA CGCGGCTTCT GGGCGTCACC
AAGGACAAGG GCGAGATGGA CTCGCTGGGT CCCGACGAGA TGCTGATGAG CACCGGGCAG
GCCAAGGACA CCAAGACGAA GGTCGGCGAC ACCGTCGAGG TGACCTTCGC GAACCTGAAG
GAGCCCAAGG AGTTCACGGT GTCGGGCATC GTCAACACCG GTGACTTCAT GGCGGCGCCG
TGGATCGTCG ACGCGTCCAA CGCAAAGTAC TTCCACGAGG ACAAGCCGAT GCAGGCGTTC
ATCGAGGTGG GCGACAAGGA CGACGTCAAG CCGGTCATGA AGGACGTCAA CGAGCTGCTG
AAGGACTATC CGCTCGTCAC GGTGATGGAC ACCAGCGCGT TCACCGAACA GCTGAACCAG
ATGTTCGACA TCATGCTGAC GGTGGTGCAG GTCCTGTTGG GTCTGGCGAT GCTGATCGCG
GTCATCGGCG TCATCAACAC GCTGACGCTG TCGATCCGGG AACGGACCAG GGAACTGGGA
CTGTTGCGGG CCACCGGGCT GACGCGCGGT CAGGTCACCC GGATGGTGAC CGTCGAGTCC
ATCGTGATCT CGCTGTTCGG CGCGCTGCTG GGCCTGGGCG TGGGCGCCGG GCTGGGTATC
GCGGCCCAGC GGGGACTGCG GACGTTCATC GACGTCCTGG CGATGCCGTG GGGAACCATG
GCGTTCTATG TGGTCGCCGC TATCGTGGTC GGTTTCTTCG CGGCGCTGAT CCCGGCCTAC
CGGGCCAACC GGATCAACGT CCTGGAGGCC ATCTCCTACG AGTAG
 
Protein sequence
MLRATFKSLL SRKARLFMSG LAVILGVAFI SGTLILNASL GDSIRDMFAT AYKNVDVQVT 
PDADESKDKV ATIPADLVDE IKSQPHVDKA TAEVADAAGG VQVLDKNEKV LPPTGPPTIG
TNWTGVNDPM EMADGSGPEA SDEVAINKGL SDATGYEVGD TMKLVLPNSG DTKPQSFEVS
GVFEYSGNRG SLGGESTVSF TTETAQKMLL GKEDVFSSVN VKSDGSVSQT ELKKQLSSEL
GGDYQIKTGD KLAEESAGQL SIILDFFNYL LLGFGTIALL VSVFLIINTF SIIVAQRTRE
LALFRAIGAG RGQVTRSVML EAFIIGALAA VVGMAVGVGL GWAGTEAMSG LFGDLQTTLS
IPMEAWIAAA AIGIGITMFA ALLPALRAGR IPPIAALQDP SNTQRPVRWF AIIGGLLLVG
GGALLTAALT KQFGKIDSDD TRIAVFSAIT VLFLGAIIFT PVLARPLVSL IGFLFSWSLP
GKLGRRNSGR NPRRTAITAT ALMIGITLVT GVGVMFSSAN ASIQKYMAKQ VNMDLMISPA
TQGQNPPTFD KSVLDEAADI DGVTKVVDGY ADSQATLDGE PIYVQATSNI KDFTRLLGVT
KDKGEMDSLG PDEMLMSTGQ AKDTKTKVGD TVEVTFANLK EPKEFTVSGI VNTGDFMAAP
WIVDASNAKY FHEDKPMQAF IEVGDKDDVK PVMKDVNELL KDYPLVTVMD TSAFTEQLNQ
MFDIMLTVVQ VLLGLAMLIA VIGVINTLTL SIRERTRELG LLRATGLTRG QVTRMVTVES
IVISLFGALL GLGVGAGLGI AAQRGLRTFI DVLAMPWGTM AFYVVAAIVV GFFAALIPAY
RANRINVLEA ISYE