Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4481 |
Symbol | |
ID | 8885686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4777652 |
End bp | 4780216 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003513219 |
Protein GI | 291301941 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.180518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.201948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGCGTG CCACGTTCAA ATCGTTGCTG TCGCGCAAGG CGCGACTGTT CATGTCCGGC CTGGCGGTGA TCCTGGGTGT CGCGTTCATC TCCGGCACCC TGATCCTCAA CGCCTCGCTG GGCGACTCGA TCCGCGACAT GTTCGCCACC GCGTACAAGA ACGTCGACGT CCAGGTCACC CCCGACGCCG ACGAGTCCAA GGACAAGGTC GCCACGATCC CCGCCGACCT GGTCGACGAG ATCAAATCCC AACCGCACGT CGACAAGGCC ACCGCGGAGG TCGCCGACGC CGCCGGCGGC GTGCAGGTGC TCGACAAGAA CGAGAAGGTC CTGCCCCCGA CCGGTCCCCC GACCATCGGC ACCAACTGGA CCGGCGTCAA CGACCCCATG GAGATGGCCG ACGGTTCCGG CCCCGAGGCG TCCGACGAGG TCGCCATCAA CAAGGGACTG TCCGATGCGA CCGGTTACGA GGTCGGCGAC ACCATGAAGC TGGTGCTGCC CAACTCCGGT GACACGAAAC CGCAGTCCTT CGAGGTCTCG GGTGTGTTCG AGTACTCCGG CAACCGGGGT TCGCTCGGTG GCGAGTCCAC CGTCTCGTTC ACCACCGAGA CGGCGCAGAA GATGTTGCTG GGCAAGGAGG ACGTGTTCTC CAGCGTCAAC GTCAAGAGCG ACGGCAGTGT CTCGCAGACC GAGCTGAAGA AGCAGCTGTC GTCCGAACTG GGCGGCGACT ACCAGATCAA GACCGGTGAC AAGCTCGCCG AGGAGTCCGC CGGGCAGCTG TCGATCATCC TCGACTTCTT CAACTACCTG CTGTTGGGCT TCGGGACGAT CGCGTTGCTG GTGAGCGTGT TCCTGATCAT CAACACCTTC TCGATCATCG TCGCGCAGCG CACCCGGGAG CTGGCCCTGT TCAGGGCCAT CGGCGCCGGA CGCGGCCAGG TGACCCGATC GGTGATGCTG GAGGCGTTCA TCATCGGCGC CCTGGCGGCC GTGGTCGGCA TGGCCGTGGG TGTGGGACTG GGCTGGGCGG GCACCGAGGC CATGAGCGGC CTGTTCGGTG ACCTCCAGAC CACTTTGTCC ATCCCGATGG AGGCGTGGAT CGCCGCGGCC GCGATCGGTA TCGGCATCAC GATGTTCGCG GCGCTGCTGC CGGCGCTGCG GGCCGGGCGG ATTCCGCCGA TCGCCGCGCT GCAGGACCCG TCCAACACGC AGCGGCCGGT GCGCTGGTTC GCCATCATCG GCGGGCTGCT GCTGGTCGGC GGTGGTGCGC TGCTGACCGC CGCGCTGACC AAGCAGTTCG GCAAGATCGA CTCCGACGAC ACCCGCATCG CGGTGTTCAG CGCGATCACG GTGCTGTTCC TGGGCGCCAT CATCTTCACC CCGGTGCTGG CCCGGCCGTT GGTGTCGCTG ATCGGTTTCC TGTTCTCGTG GTCGCTGCCG GGCAAGCTGG GCCGCCGCAA CTCGGGCCGC AACCCGAGGC GCACGGCGAT CACGGCCACC GCGCTGATGA TCGGCATCAC TTTGGTGACC GGTGTGGGCG TCATGTTCTC CTCGGCCAAC GCGAGCATCC AGAAGTACAT GGCCAAACAG GTCAACATGG ACTTGATGAT CTCGCCCGCG ACGCAGGGGC AGAACCCGCC CACCTTCGAC AAGTCGGTGC TCGACGAGGC CGCCGACATC GACGGGGTCA CCAAGGTCGT GGACGGCTAC GCCGATTCGC AGGCCACTTT GGATGGCGAA CCGATCTACG TCCAGGCGAC GTCGAACATC AAGGACTTCA CGCGGCTTCT GGGCGTCACC AAGGACAAGG GCGAGATGGA CTCGCTGGGT CCCGACGAGA TGCTGATGAG CACCGGGCAG GCCAAGGACA CCAAGACGAA GGTCGGCGAC ACCGTCGAGG TGACCTTCGC GAACCTGAAG GAGCCCAAGG AGTTCACGGT GTCGGGCATC GTCAACACCG GTGACTTCAT GGCGGCGCCG TGGATCGTCG ACGCGTCCAA CGCAAAGTAC TTCCACGAGG ACAAGCCGAT GCAGGCGTTC ATCGAGGTGG GCGACAAGGA CGACGTCAAG CCGGTCATGA AGGACGTCAA CGAGCTGCTG AAGGACTATC CGCTCGTCAC GGTGATGGAC ACCAGCGCGT TCACCGAACA GCTGAACCAG ATGTTCGACA TCATGCTGAC GGTGGTGCAG GTCCTGTTGG GTCTGGCGAT GCTGATCGCG GTCATCGGCG TCATCAACAC GCTGACGCTG TCGATCCGGG AACGGACCAG GGAACTGGGA CTGTTGCGGG CCACCGGGCT GACGCGCGGT CAGGTCACCC GGATGGTGAC CGTCGAGTCC ATCGTGATCT CGCTGTTCGG CGCGCTGCTG GGCCTGGGCG TGGGCGCCGG GCTGGGTATC GCGGCCCAGC GGGGACTGCG GACGTTCATC GACGTCCTGG CGATGCCGTG GGGAACCATG GCGTTCTATG TGGTCGCCGC TATCGTGGTC GGTTTCTTCG CGGCGCTGAT CCCGGCCTAC CGGGCCAACC GGATCAACGT CCTGGAGGCC ATCTCCTACG AGTAG
|
Protein sequence | MLRATFKSLL SRKARLFMSG LAVILGVAFI SGTLILNASL GDSIRDMFAT AYKNVDVQVT PDADESKDKV ATIPADLVDE IKSQPHVDKA TAEVADAAGG VQVLDKNEKV LPPTGPPTIG TNWTGVNDPM EMADGSGPEA SDEVAINKGL SDATGYEVGD TMKLVLPNSG DTKPQSFEVS GVFEYSGNRG SLGGESTVSF TTETAQKMLL GKEDVFSSVN VKSDGSVSQT ELKKQLSSEL GGDYQIKTGD KLAEESAGQL SIILDFFNYL LLGFGTIALL VSVFLIINTF SIIVAQRTRE LALFRAIGAG RGQVTRSVML EAFIIGALAA VVGMAVGVGL GWAGTEAMSG LFGDLQTTLS IPMEAWIAAA AIGIGITMFA ALLPALRAGR IPPIAALQDP SNTQRPVRWF AIIGGLLLVG GGALLTAALT KQFGKIDSDD TRIAVFSAIT VLFLGAIIFT PVLARPLVSL IGFLFSWSLP GKLGRRNSGR NPRRTAITAT ALMIGITLVT GVGVMFSSAN ASIQKYMAKQ VNMDLMISPA TQGQNPPTFD KSVLDEAADI DGVTKVVDGY ADSQATLDGE PIYVQATSNI KDFTRLLGVT KDKGEMDSLG PDEMLMSTGQ AKDTKTKVGD TVEVTFANLK EPKEFTVSGI VNTGDFMAAP WIVDASNAKY FHEDKPMQAF IEVGDKDDVK PVMKDVNELL KDYPLVTVMD TSAFTEQLNQ MFDIMLTVVQ VLLGLAMLIA VIGVINTLTL SIRERTRELG LLRATGLTRG QVTRMVTVES IVISLFGALL GLGVGAGLGI AAQRGLRTFI DVLAMPWGTM AFYVVAAIVV GFFAALIPAY RANRINVLEA ISYE
|
| |