| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4479 |
|---|
| Symbol | |
|---|
| ID | 8885684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4775978 |
|---|
| End bp | 4776652 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003513217 |
|---|
| Protein GI | 291301939 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.518456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.598935 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG ACAAGCCCAT CAAGGTTCTG CTCGTCGACG ACCAGCCGCT GCTGCGCACC
GGGTTCCGGA TGGTGCTGGG GGCCGAGGCC GACATCGACA TCATCGCCGA GGCCGGTGAC
GGCGTAGAGG CCGTCGACCT GGCGCGGCGA CTGCTTCCCG ACGTGGTCCT CATGGACATC
CGGATGCCCC GCATGGACGG GGTCGCGGCC ACCAAGGCCA TCGTCGAGGC GAAACTGCCG
GTGCGGGTGC TGATCCTGAC CACCTTCGAC CTGGACGAGT ACGTGGTGGG CGCGCTGCGC
GCCGGAGCCG CCGGGTTCCT GGCCAAGGAC GTCCCCGCCG AGGACCTGGT CGCGGCGATC
CGTTCGGTGT CGTCCGGCGA GGCGGTCGTG GCGCCGAGGA TCCTGCGGCG GCTGCTGGAG
AAGTTCGTCG ACCGGCTGCC CGAACCCGAC GGCGCCACCC CGGCCAGCCT CGAGGTGCTG
ACCGAACGGG AGCGCGAGGT GCTGATCCTG GTGGCCAAGG GCATGTCCAA CACCGAAATC
GCCAAAGAGC TGACGGTCAG TGAGACGACG GTGAAGACTC ATGTCGGGCA CGTGCTGACC
AAGCTGGGCG TGCGGGACCG GGTGCAGGCC GTGGTGCTGG CGTATGAGAC CGGGCTGGTA
AAGCCCAGTA GGTGA
|
|---|
| Protein sequence | MSTDKPIKVL LVDDQPLLRT GFRMVLGAEA DIDIIAEAGD GVEAVDLARR LLPDVVLMDI
RMPRMDGVAA TKAIVEAKLP VRVLILTTFD LDEYVVGALR AGAAGFLAKD VPAEDLVAAI
RSVSSGEAVV APRILRRLLE KFVDRLPEPD GATPASLEVL TEREREVLIL VAKGMSNTEI
AKELTVSETT VKTHVGHVLT KLGVRDRVQA VVLAYETGLV KPSR
|
|---|
| |