Gene Snas_4400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4400 
Symbol 
ID8885601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4693273 
End bp4694037 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID 
ProductSpoOM family protein 
Protein accessionYP_003513139 
Protein GI291301861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.159166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTTCC GCATCATCAA AGCCGTCCTC GGCAAGGGGG TCGGCGTCGA CACTGTCCTC 
AATGGCACTG AGGTGACCCC CGGTGGGTCG CTGTCCGGCG AGGTCAAGTT CAACGGCGGC
GAAGTGGACG CCAAGGTCGA GGGAATCACG CTGGAGTTCA CCGCGGTCGT CGAAGAGGAC
GCCAAGGGCG AGGAACGCAA GGCCACCTAC CACTTCCACC GTGCCCAGGT GTCCGGCGGT
TTCGAACTGG CCGCGGGCAC GTCCCATGCG GTGGACTTCG ATGTGCCGGT GCCGTGGGAG
ACGCCGTTGA GCGCGTTCGC CGGGCGGCCG TTGCCGGGCA TGACCTTGGG TGTCGCCACC
GAACTGGCTC TGGACAAGGC TTTCGACAAG GGCGACCTCG ACCCGTTGAC GGTGGAGCCG
TTGCCGGTAC ACGTCGCGGC GCTCAACGCG ATGGACGCGC TGGGCCTGGT GTTCCAGACC
GCCGACTTGG AGGCCGGGAC GCTGCCGGGT TCCCACATGC CGTTCTACCA GGAGATCGAG
TACTGGCCCG GTGGCGAGTT CAAGGGCTCG TTCACCGAGG TGGAACTGAC CTTTGTGACC
AGTAAGTCCT CGACCGACAT CCTGTTGCAG GCCAACGACC AGGGCAGTCC GCTGTCGGCC
GGTCACGACA AGTACCAGCG CTTCACGGTC AAGAACGACG ACACCTCGGA CCTGACCGAC
GTGATCCGCA CCCAGTTGGA GCAGCTGGCG CAGCGGCACG CCTAG
 
Protein sequence
MVFRIIKAVL GKGVGVDTVL NGTEVTPGGS LSGEVKFNGG EVDAKVEGIT LEFTAVVEED 
AKGEERKATY HFHRAQVSGG FELAAGTSHA VDFDVPVPWE TPLSAFAGRP LPGMTLGVAT
ELALDKAFDK GDLDPLTVEP LPVHVAALNA MDALGLVFQT ADLEAGTLPG SHMPFYQEIE
YWPGGEFKGS FTEVELTFVT SKSSTDILLQ ANDQGSPLSA GHDKYQRFTV KNDDTSDLTD
VIRTQLEQLA QRHA