| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4356 |
|---|
| Symbol | |
|---|
| ID | 8885557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4639801 |
|---|
| End bp | 4641594 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | acetolactate synthase large subunit, biosynthetic type |
|---|
| Protein accession | YP_003513096 |
|---|
| Protein GI | 291301818 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0195043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.165363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATT CACCAGTGAT AGCCAAACCC CGGCCTCCTC GAACGAGCCG GGTTGCCCCT
CCCAACCTCA CCGGCGCGCA GGCGCTCGTG CGTTCACTCG AAGAACTCGA CGTCGAGGTC
GTATTCGGTA TTCCCGGCGG CGCGATTCTC CCGGCCTATG ACCCGATGAT GGACTCCACC
CGGGTCCGGC ACGTCCTGGT GCGCCACGAG CAGGGCGCCG GGCACGCGGC CACCGGCTAC
GCCCAGGCCA CCGGAAAGGT CGGAGTGTGC ATGGCCACAT CCGGACCCGG CGCCACCAAC
CTCGTCACCC CGCTGGCCGA CGCCTATATG GACTCGGTGC CGATGGTGGC GATCACCGGT
CAGGTGCCCA GCGCCCTGAT CGGCAGCGAC GCCTTCCAGG AGGCCGACAT CCACGGCGTG
ACCATGCCGG TCACCAAACA CGGCTACCTG GTCGAGTCGG TGGAGGACAT TCCCCGGGTG
CTGGCCGAGG CGTTCCACAT CGCCCGCACC GGCCGCCCGG GCCCGGTCCT GGTGGACATC
CCCAAGGACC TGTTGCAGGC CAGCGCCCCG TACGAGTGGC CGCCGGCGGT GCAGTTGCCG
GGCTACAAGC CCACGACGCA GCCGCACGGC AAGCAGATCC GGCAGGCGGC CGAGCTGATC
GCCGCCGCCC GCCGACCGGT GCTGTACGTC GGCGGCGGGG TGCTGAAAGC CGAGGCCTGC
GCCGAACTCA AACGCTTCGC CGAGACCTGC GGGGCGCCGG TGGTGACGAC GCTGATGGCG
CGCGGCGCCT TCCCCGACTC GCACCCGCAG CACGTGGGCA TGCCGGGCAT GCACGGCACC
GTCCCGGCGG TGTTCGCGTT GCAGCGCTCC GACCTGATCG TGGCGCTGGG CGCCCGGTTC
GACGACCGGG TGACCGGCCG CATCGACACC TTCGCCCCCG ACGCCCAAGT GGTGCATGTG
GACATCGACC CGGCCGAGAT CGGCAAGAAC CGGCACGCCG ACGTTCCCAT CGTCGGTGAC
GCCAAGGCCG CGATCACGCA GCTGACCGAC GCCTACGACC CGGCCGCCGA CGCGTCCCGT
ATGGACGAAT GGTGGTCGGA GCTCAACGGC CTGCGCGAGC GTTACCCGCT GGGCTACGAG
AAGCACACCG ACGACACGCT GGAACCGCAG CACGTCATCG AACGCATCGG CGCGATCGCC
GGACCCGAGG CGATCTACGC CACCGGTGTC GGCCAGCACC AGATGTGGGC CTCGCAGTTC
ATCAAGTACG ACCTGCCCTA CAGCTTCCTC AACTCCGGCG GCCTGGGCAC GATGGGTTAC
GCGGTCCCGG CCGCGATGGG CGCCAAGTTC GGCAAACCCG ACTCCACGGT GTGGGCCATC
GACGGCGACG GCTGTTTCCA GATGACCAAC CAGGAACTGG CGACCTGCGC ACTGGAGGGC
ATCCCGATCA AGGTGGCCGT CATCAACAAC GGCAACCTGG GCATGGTGCG GCAGTGGCAG
ACGCTGTTCT ACAACCAGCG CTACTCCAAC ACCAACCTGG GCACCCACAA ACGGGTCCCC
GACTTCGTCA AGCTGGCCGA GGCGCTGGGC TGCGTGGGGC TGCGCTGCGA GACCCACGCC
GACGTGGACG CCACCATCAA CAAGGCGATG GAGATCAACG ACCGTCCGGT GGTCATCGAC
TTCATCGTCG GCGCCGACGC CATGGTGTGG CCGATGGTCC CGGCCGGAGT CAGCAACGAC
GAGATCCTGG CGGCCCGCGA CGTGCGGCCG ATCTTCGAAG AGGGTGAATG CTGA
|
|---|
| Protein sequence | MDNSPVIAKP RPPRTSRVAP PNLTGAQALV RSLEELDVEV VFGIPGGAIL PAYDPMMDST
RVRHVLVRHE QGAGHAATGY AQATGKVGVC MATSGPGATN LVTPLADAYM DSVPMVAITG
QVPSALIGSD AFQEADIHGV TMPVTKHGYL VESVEDIPRV LAEAFHIART GRPGPVLVDI
PKDLLQASAP YEWPPAVQLP GYKPTTQPHG KQIRQAAELI AAARRPVLYV GGGVLKAEAC
AELKRFAETC GAPVVTTLMA RGAFPDSHPQ HVGMPGMHGT VPAVFALQRS DLIVALGARF
DDRVTGRIDT FAPDAQVVHV DIDPAEIGKN RHADVPIVGD AKAAITQLTD AYDPAADASR
MDEWWSELNG LRERYPLGYE KHTDDTLEPQ HVIERIGAIA GPEAIYATGV GQHQMWASQF
IKYDLPYSFL NSGGLGTMGY AVPAAMGAKF GKPDSTVWAI DGDGCFQMTN QELATCALEG
IPIKVAVINN GNLGMVRQWQ TLFYNQRYSN TNLGTHKRVP DFVKLAEALG CVGLRCETHA
DVDATINKAM EINDRPVVID FIVGADAMVW PMVPAGVSND EILAARDVRP IFEEGEC
|
|---|
| |