Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4301 |
Symbol | |
ID | 8885502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4593305 |
End bp | 4593970 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003513041 |
Protein GI | 291301763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAACT GCTACGGTTG CCGCATGGCC GAACCCGCGC CCCGACGCAC CCCCGAGACC TCCGAACGGC AACGCGACGC CGAACGCAGC AAACGGCGGT TGCTGGAGGC GGCTTTTGAC GAGTTCGCCG CCCACGGCTT CGCCGGGGCG CGGGTCGGCC GGATCGCCGA GGCGGCCGGA GTCAACAAGC AGCTCATCAG CTACTACTTC GGCTGCAAAG AGGGCCTGTA CCAGGCGATG CAGCGCAGCT GGCTGGACGC CGAGGCGGTC AACGCCAACC CCGCCGTCCC GGCCGCCGAC ACCATGATGT GGTACCTGCG CGAGTCCCTT TCGGACCCGC GCGGGGTCCG GCTGCTGCTG TGGCAGGCCC TCAACGACGA CGCCCCCGAC GTACAGGACC AGGCCGACTA CGAACGGGAA CAGGAGTGGA TGCGTCGTCG CGTGGAATCA GGCGAGTTCG CCGCCGACCT GGACCCGGAG GCACTGCAAC TGGTGTTCAT GGGGATGACC ATGATGCCCG CCGCCATGCC GCACCTGGTC CGCCAGCTGT TCGGCGTCGA ACCGAACTCC GAGGAGTTCA TCGAGAGATA CGGCAAGACA CTGCGCCGCG TCCTGGCGGC GCTCGCCGAT CCACCCAAAC CCCCCAAGAA AGGGAGCAAC CCATGA
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Protein sequence | MINCYGCRMA EPAPRRTPET SERQRDAERS KRRLLEAAFD EFAAHGFAGA RVGRIAEAAG VNKQLISYYF GCKEGLYQAM QRSWLDAEAV NANPAVPAAD TMMWYLRESL SDPRGVRLLL WQALNDDAPD VQDQADYERE QEWMRRRVES GEFAADLDPE ALQLVFMGMT MMPAAMPHLV RQLFGVEPNS EEFIERYGKT LRRVLAALAD PPKPPKKGSN P
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