Gene Snas_4301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4301 
Symbol 
ID8885502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4593305 
End bp4593970 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003513041 
Protein GI291301763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACT GCTACGGTTG CCGCATGGCC GAACCCGCGC CCCGACGCAC CCCCGAGACC 
TCCGAACGGC AACGCGACGC CGAACGCAGC AAACGGCGGT TGCTGGAGGC GGCTTTTGAC
GAGTTCGCCG CCCACGGCTT CGCCGGGGCG CGGGTCGGCC GGATCGCCGA GGCGGCCGGA
GTCAACAAGC AGCTCATCAG CTACTACTTC GGCTGCAAAG AGGGCCTGTA CCAGGCGATG
CAGCGCAGCT GGCTGGACGC CGAGGCGGTC AACGCCAACC CCGCCGTCCC GGCCGCCGAC
ACCATGATGT GGTACCTGCG CGAGTCCCTT TCGGACCCGC GCGGGGTCCG GCTGCTGCTG
TGGCAGGCCC TCAACGACGA CGCCCCCGAC GTACAGGACC AGGCCGACTA CGAACGGGAA
CAGGAGTGGA TGCGTCGTCG CGTGGAATCA GGCGAGTTCG CCGCCGACCT GGACCCGGAG
GCACTGCAAC TGGTGTTCAT GGGGATGACC ATGATGCCCG CCGCCATGCC GCACCTGGTC
CGCCAGCTGT TCGGCGTCGA ACCGAACTCC GAGGAGTTCA TCGAGAGATA CGGCAAGACA
CTGCGCCGCG TCCTGGCGGC GCTCGCCGAT CCACCCAAAC CCCCCAAGAA AGGGAGCAAC
CCATGA
 
Protein sequence
MINCYGCRMA EPAPRRTPET SERQRDAERS KRRLLEAAFD EFAAHGFAGA RVGRIAEAAG 
VNKQLISYYF GCKEGLYQAM QRSWLDAEAV NANPAVPAAD TMMWYLRESL SDPRGVRLLL
WQALNDDAPD VQDQADYERE QEWMRRRVES GEFAADLDPE ALQLVFMGMT MMPAAMPHLV
RQLFGVEPNS EEFIERYGKT LRRVLAALAD PPKPPKKGSN P