| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4263 |
|---|
| Symbol | |
|---|
| ID | 8885464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4554657 |
|---|
| End bp | 4555400 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003513005 |
|---|
| Protein GI | 291301727 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.218256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGC TGGAGGGCAA GGGCGCCGTC GTGACCGGCG GTTCGCGCGG GATCGGCCGC
GCCATCGTCG AGCGGCTGGC CGCCGACGGC GCCACCGTCG TTTTCAGTTA CGCCAGCAAC
AAGACCGCCG CCGACGAGGT GGTCGCCACC GTGACCGCGT CCGGCGGCAC CGCGCACGCC
GTGGCCGCCG ACTTCACCGA CCCCGAGGCC CCCGAACGCC TGATGGCCGC CGCCGCGGAA
CTGCTGCCCG GCCTGGACAT CCTGGTCAAC AACGCGGTCA TGGAGATCAC CCCGACTCCC
CTGACCGAGG TCACCGACGA ACTGTTCGAC ACGACCTTCA CCGCCAACGC CCGCGCGCCG
TTCCAGACCC TGCGGTACGC CGCCAAGAAC ATGAACGACG ACGGCCGCGT CATCAACATC
TCGACGCTCA ACACCTCCCG GCCGTTTCCC GGCCTGACCA CCTACGTGTC CGGCAAGGGC
GCGCTGGAGC AGATGACCAA CGTGGCCGCG TTCGAGCTGG GCGCGCGCGG CATCACCGCC
AACGTGGTCT CCCCCGGCGC CACCGACACC GACCTGTTGC GCGACACCAA TCCGCCCGAG
GCCCTGGAGA TGCTCAACAC GATGACCCCG CTGGGGCGGC TGGGCCTGCC GTCCGACATC
GCCGACGTGG TGTCGTTCCT GGCCGGTCCC GACTCCCGCT GGATCACCGG TCAGAACATC
CGTGCCACCG GTGGCCTGAT GTAA
|
|---|
| Protein sequence | MPQLEGKGAV VTGGSRGIGR AIVERLAADG ATVVFSYASN KTAADEVVAT VTASGGTAHA
VAADFTDPEA PERLMAAAAE LLPGLDILVN NAVMEITPTP LTEVTDELFD TTFTANARAP
FQTLRYAAKN MNDDGRVINI STLNTSRPFP GLTTYVSGKG ALEQMTNVAA FELGARGITA
NVVSPGATDT DLLRDTNPPE ALEMLNTMTP LGRLGLPSDI ADVVSFLAGP DSRWITGQNI
RATGGLM
|
|---|
| |