Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4192 |
Symbol | |
ID | 8885393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4488413 |
End bp | 4493017 |
Gene Length | 4605 bp |
Protein Length | 1534 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | DEAD/H associated domain-containing protein |
Protein accession | YP_003512935 |
Protein GI | 291301657 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0456896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG AACCGCTCGC CGCCTTCAGC CGACCGACCC GGGCCTGGTT CGCCGAACGG TTCGGCGCTC CCACGCCCGC GCAGGCGGGG GCCTGGGAGG CGATCGCGCG GGGCGACAAC GCGCTCGTGG TGGCACCCAC CGGTTCCGGC AAGACGCTGT CGGCGTTCCT GTGGTCGCTG GACCGGCTGG CGACCACGCC CAAGCCCGAA GACCCCAAGC GGCGGTGCCG GGTGCTGTAC GTCAGCCCGC TCAAGGCGCT GGCCTACGAC GTCGAACGCA ACCTGCGGCA GCCGTTGGCG GGCATCGGTG AGGAGGCGAA GCGGCTGGGC GTGGAGGCGC CGGACGTGTC GGTGTCGATG CGCACCGGCG ACACCCCGGC CGACCAGCGC CGCGCCTTCG CCCGCACGCC GTCCGACATC CTCATCACCA CACCCGAGTC ACTGTTCCTG CTGTTGACCT CGGCGGCCCG CGACGCGTTG CGCGGCATCG ACACGGTGAT CATCGACGAG GTGCACGCGG TGTGCGGCAC CAAGCGGGGC GCGCACCTGG CGCTGTGCCT GGAACGGCTG GACGCGCTGC TTCCGCAACC GGCGCAACGC ATCGGGCTGT CGGCGACGGT GCGGCCGATC GAGGAGACCG CCCGGTACGT GGGCGGGCCG CGGCCGGTGA CGATCGTGAA GCCACCGGCG GCCAAGACCA TCGAGCTGTC GGTGGACGTG ACCGTCCCGG ACCTGGCCGA CCTGACCGAC GTCGACGAGC AGGGGCAGCC CTCGATCTGG CCGTCCATCG TCAAGCGGCT GCACGATCTG ATCGAAGCCA ACCGGTCCAC CATCGTGTTC GTCAACTCGC GTTCGCTGGC CGAGCGGTTG TGTTCGCGGC TCAACGAGGT CGTCGTCAAA CACGACACCC CCTACCGCTC GCAACCGGCG TACATCATGG CGCAGTCCTC GGCCGCCGCC GGGGTGATGC CGGTGCTGGC GCGCGCCCAC CACGGCTCGA TGTCGCGGGA GGAGCGGCTC CAGGTCGAGA CGGGGCTGAA GTCGGGCGAG CTGCGGGCCG TGGTGTCGAC GTCCAGTCTG GAACTGGGCA TCGACATGGG CGCGGTGGAC CTGGTGGTGC TCATCGGTTC CCCGCCCAGT GTGGCCTCGG GCGTGCAGCG GGTCGGCCGG GCCGGCCACC AGGTCGGCGC GGTGTCGCAG GGCGTGGTGC TGCCGACCCA CCGTTCCGAC CTGCTGGCCG CGACCGTCGC GGCCGAACGG ATGCTGGACG GCGGCATCGA GGAACTGCGG CCACCGTCCA ACCCGATCGA CATCCTGTCG CAGCACCTGG TGTCCATGGT GGCCATGGAC GACTGGCGGG TCGACGACCT GGCCCGGGTG GTGCGCGGGG CGGCGCCGTT CGCCTCACTG TCGGACGAGG CGCTGCGCTC GGTGCTGGAC ATGGTGTCGG GCAAGTATCC GTCCACCGGG TTCTCCGGTC TGAAGCCGAA ACTGGTGTGG AACCGGGCCA CCGGCAGGCT CACGGCACGG CCGGGGGCAC AGCGGCTGGC GGTCCTCAAC GCGGGAACGA TCCCGGACCG GGGCCTGTAC GGGGTGTACC TGGCCGAGGG CGGCACGGGT TCCCGGGTCG GGGAGCTGGA CGAGGAGATG ATCTACGAGT CGCGAGTGGG CGACGTGTTC CTCCTGGGCG CCACCTCATG GCGGATCGAG TCGATCACAC CCGACCGGGT ACTGGTGTCC CCGGCGCCGG GACAGGCGGC CCGCATGCCG TTCTGGAAGG GCGAAGACGT GGGCCGCCCC GCCGAGTTCG GGCGCGCGAT CGGAGTACGC CTACGCGAGC TGACCAACGA GAGCGAGGCG AACGCGGGCG GGAAGCGCCA CGCGGCCGAC GGCGAGCCGG GCGCCGCGAA CGCGGGCGCG ACGGCCACCG CCTCCGATGG CGCGTCAGCC GACGAGAGCG AGGAGAGCCC GGCCGGGAAG CGCAACGCGG CCGACGGCAC GTCCGGCGGC GCGAGCTCGC GCCGCCACGG TTTGCCGGGC TCGGCCGGGT CGGTGCTGGC CGATTCGGCG GCGAGCAACC TGGCCGCCTA TGTGGACCAG CAGCGGGAGC ACACCGGGGC GGTGCCCGAC GATCGCACTG TTGTGGTGGA GCGGTTCCGC GACGAGCTGG GTGACTGGCG CGTCATCGTG CACTGTCTGC TGGGCGCGCG GGTGAATCGG CCGTGGGCGT TGGCGATCGC CGCGAGGTTG CGGGAGCGGC TCGGCGTCGA CGCCCACGCC ATGGGCACCG ACGACGGCAT CGTGCTGCGC ATCCCCGACA TGACCGACCC GCCCGGCGCC GAGCTGTTGG CCTTCGAGCC GGAGGCCATC ACCCGGATCG TCACCGAGCA GCTGACCGCC TCGCCCCTGT TCTCGGCCCG GTTCCGGGAG TGCGCCGCGC GGGCACTGTT GTTGCCGCGC AAGGCGATCG GACGCAGGCA GCCGCTGTGG CAGCAGCGGC AGCGCGCCGC GCAGCTGTTC GAGGTGGCGC GCGAGTTCAC CGACTTCCCC ATCACCGCCG AGGCCGCGCG GGAGTGCCTG GAGGAGTACT TCGACATGGA CGCCCTGACC GGGCTGATGC GAAGCCTCGC CGAGCGCTCC ACCGCCGCTG TGGACGTCGT GACCGAGTCG GCCTCTCCGT TCGCGCTGAG CATCCTGTCG TCGTTCGTGG CCGGGAACCT GTACGGGGAG GACGAACCGC TGGCCGAGCG CCGGGCGGCG GCGTTCAACT CCGGACTGCT GGACGAGCTG CTCGGCGAGG GCGATCAACT GCTCGACCCC GCGGTGGTGG CCGAGGCCGA GGCGTGGCTG CAATGGCGCG ACGGCCGAGA CCTGTCGGGC GCCGAGGACG TGGCGGAACT GCTGCGGGTC GTCGGCGACC AGTCAGACGG AGATCTCGCG GAGCGCGGCA TCGCCGTCGC GGCCGCCGAA GAGCTGGAGG CGGCCGGACG CGCGGTGGCG GTCACGGTGG CCGAACAGCG ACGCTGGATC GCCGTGGAGG ACGCGGTGCG CTACCGCGAC GGCCTTGGAG TGGAGCTACC CGAGCTGCCG CCGGAACTGT TGTCGACCAA CGGAACCGGC GCGACGGCCG GTTCGCCGAC ACCGGACCCC CTGGACGACC TGGTCGCCCG CTACGCCCGC ACCCACGGTC CGTTCGAGAC CGCCGAATGC GCCGAGCGCT TCGGACTCCC CGGTCCGCTC GTCGAGGCGG CTCTGCACCG GCTGGACGCC GACGGCGTCG TCCGACACGG ATCGTACACA CAGGACGGAT CACGGCAGTG GTGCGCCGTG GACGTGCTGC GCCTGTTGCG GCGCAAGACC CTCGCGGCGC TGCGCGCCGA GATCTCACCG GTGCCGGTCG CCAAGTACGT GTCGTTCCTG GCCGACTGGC AGGGCGTCGG CGGCAAGGCG ATCGGGACCG ACGCGGTGGC CGACGTCCTG GATCAGTTGC AGGGCACCGC GATCCCCGCC TCGGCCTGGG AGTCGACGGT GCTGCCGGTG CGGGTGGGCG AGTACTCCCC CGCCCAGCTG GACGAGCTGA CCGGCTCCGG CGAACTGCTG TGGAGCGGTT CGGGCGGCCT GCCGGGCACC GACGGCTGGC TGACCTTCGC CTACGCCGAG ACCGCGCCGC TGCTGCTGCC GCTGCCCGAC GAGGAGGCGA TCGCCGGTGA CCTGCACCGG GAACTGCTGG ACGCCTTGGA GTCGCCCCGG TTCTTCCGCG ACCTGACCGG CGTGGTCGAG GGCGACGACC CCGAGGTGCT GGAGGCGCTG TGGGACCTGG TGTGGGGCGG CTGGGTGTCC AACGACTCGC TGGCACCGTT GCGCGCCAAG CTTTCCGGGC CGTCGCCCAA ACCGCAGCAG TCGCGCCGTC CCCGTCGGCC GGGCCGGTTC ACCGTCACCC GGCAGGCGGT GCGTTCCGCC CCGCCGTCGG CGGCCGGACG CTGGTACCGG CTGCCCGACC GCGACACCGA CCCGACCCGC CGCGCCCACG CCGCCACCGC GACCCTGCTG GACCGGCACG GCGTCGTGGT GCGGGGCGCC GCCGCCGGTC ACGCCAGCGG CTTCGCGGGC CAGTACCCGA TCCTGTCGGC GATGGAGGAG CGCGGCGCCG CCCGGCGCGG GTACTTCGTG TCCGGTCTGG GCGCGGCCCA GTTCGCCGAA CCCGGTGCCG TGGACCGGCT CCGCTCGGCG ACCCCCAAGG GCGCGCTGGT GCTGGCGGCC TGCGACCCGG CCAACCCCTT CGGCGCCGGG ATGCCGTGGC CCGCCCGCTC CAGCGAGGAG TCGGGCCACC GCGCGGGCCG CAAGGCCGGG GCGCTGGTGG TCATCGTCGA CGGCGAACTG GCCTGGTACG TCGAACGCGG CGGCCGCACC ATCCTGACCT ACACGGCCGA CCGACAGCGC ACCGTCGCGG CGGCCGAGGC CCTGGTCGCG ACCGCCAACC GGGGCGGGCT GGCCCGCGTC ACCGTCACCC ACGTCGACGG CACCCCGATC GCGGGCACCC CGGTCGGCGC GGCCCTGACC GAGGCGGGCC TGCGCGCGAC CCCGAAGGGC CTCAAGTTCG GCTAG
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Protein sequence | MTTEPLAAFS RPTRAWFAER FGAPTPAQAG AWEAIARGDN ALVVAPTGSG KTLSAFLWSL DRLATTPKPE DPKRRCRVLY VSPLKALAYD VERNLRQPLA GIGEEAKRLG VEAPDVSVSM RTGDTPADQR RAFARTPSDI LITTPESLFL LLTSAARDAL RGIDTVIIDE VHAVCGTKRG AHLALCLERL DALLPQPAQR IGLSATVRPI EETARYVGGP RPVTIVKPPA AKTIELSVDV TVPDLADLTD VDEQGQPSIW PSIVKRLHDL IEANRSTIVF VNSRSLAERL CSRLNEVVVK HDTPYRSQPA YIMAQSSAAA GVMPVLARAH HGSMSREERL QVETGLKSGE LRAVVSTSSL ELGIDMGAVD LVVLIGSPPS VASGVQRVGR AGHQVGAVSQ GVVLPTHRSD LLAATVAAER MLDGGIEELR PPSNPIDILS QHLVSMVAMD DWRVDDLARV VRGAAPFASL SDEALRSVLD MVSGKYPSTG FSGLKPKLVW NRATGRLTAR PGAQRLAVLN AGTIPDRGLY GVYLAEGGTG SRVGELDEEM IYESRVGDVF LLGATSWRIE SITPDRVLVS PAPGQAARMP FWKGEDVGRP AEFGRAIGVR LRELTNESEA NAGGKRHAAD GEPGAANAGA TATASDGASA DESEESPAGK RNAADGTSGG ASSRRHGLPG SAGSVLADSA ASNLAAYVDQ QREHTGAVPD DRTVVVERFR DELGDWRVIV HCLLGARVNR PWALAIAARL RERLGVDAHA MGTDDGIVLR IPDMTDPPGA ELLAFEPEAI TRIVTEQLTA SPLFSARFRE CAARALLLPR KAIGRRQPLW QQRQRAAQLF EVAREFTDFP ITAEAARECL EEYFDMDALT GLMRSLAERS TAAVDVVTES ASPFALSILS SFVAGNLYGE DEPLAERRAA AFNSGLLDEL LGEGDQLLDP AVVAEAEAWL QWRDGRDLSG AEDVAELLRV VGDQSDGDLA ERGIAVAAAE ELEAAGRAVA VTVAEQRRWI AVEDAVRYRD GLGVELPELP PELLSTNGTG ATAGSPTPDP LDDLVARYAR THGPFETAEC AERFGLPGPL VEAALHRLDA DGVVRHGSYT QDGSRQWCAV DVLRLLRRKT LAALRAEISP VPVAKYVSFL ADWQGVGGKA IGTDAVADVL DQLQGTAIPA SAWESTVLPV RVGEYSPAQL DELTGSGELL WSGSGGLPGT DGWLTFAYAE TAPLLLPLPD EEAIAGDLHR ELLDALESPR FFRDLTGVVE GDDPEVLEAL WDLVWGGWVS NDSLAPLRAK LSGPSPKPQQ SRRPRRPGRF TVTRQAVRSA PPSAAGRWYR LPDRDTDPTR RAHAATATLL DRHGVVVRGA AAGHASGFAG QYPILSAMEE RGAARRGYFV SGLGAAQFAE PGAVDRLRSA TPKGALVLAA CDPANPFGAG MPWPARSSEE SGHRAGRKAG ALVVIVDGEL AWYVERGGRT ILTYTADRQR TVAAAEALVA TANRGGLARV TVTHVDGTPI AGTPVGAALT EAGLRATPKG LKFG
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