Gene Snas_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4070 
Symbol 
ID8885271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4348786 
End bp4349868 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003512815 
Protein GI291301537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.522742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC TCGTACTGCG GGACGTTCGC AAGACCTACC GCACCAAGGG CCGACCCGAG 
GTGGAAGCCG TGCGCGGCTT CGATCTCGAG GTCAACAGTG GTGAGCTCGT GGGCCTGCTC
GGCCCGTCCG GGTGCGGCAA GTCCACCACC CTGCGCATGA TCGCGGGACT GGAGGACGTC
ACCGGCGGCG ACATCGCGGT GGGGGGACGG TCGATGGTCG GGTTGCCCCC GCAGAAACGC
AGCATCGGGG TGGCGTTCGA GAACTACGCG CTGTACCCGC CGCTGACCGT CGCCGAGAAC
ATCGCGTTCG GGATGCGGGC TCGCGGGCAC CGTAAGGCCG AGCGGGCCGC TCGGGTCGCC
GATGTGGCGG GGCGGATCGG GTTGAGCGAT ATTTTGGACG CGCACCCGGC TGGGTTGTCG
TCCGGGCAGA AGCAGCGGGT AGCGTTGGCG CGCGCTGTGG CCCGGGAGCC CGAGGTGCTG
CTGCTGGACG AGCCGCTGTC GCATCTGGAC GCCGCGCAGC GGGACGTGAC CCGGCGCGAG
TTGCGGCATT TGCAGCAGGA GCTCGGATAC ACGACCATCC TGGTCACCCA TGACCAGGAG
GAGGCGCTGA GCCTGGCCGA CCGGGTGGTG GTCATGAACG ACGGTGTCGT GCAGCAGGTC
GGTACTCCCG ACGTCATCTA CGACGACCCG GTGAACCTGT TCGTGGCCCA GTTCGTCGGC
GAGCCCGCGA TGAACATCCT CGATGGACGG CTCGACGACG ACGGGGTGCG GCTGTCGCCC
GACCTGACGA TCCCGGTGCG CACCCGCGAG CCCCGCCACG ATCGAGCGGT CACCGTCGGC
GTGCGGCCCG AGGACGTCAC CCTCACCGGC GCGGCCGAAG CCCACGCCAC CGGAACCGTT
GTGGTGTACG AGGACCTACA GGAGTACGGG CTGGCGACCA TCGAACTGCC CGGAGTGGAC
ACCCGCGTGG TCGCCCAGAC CGCTCCCGGC CTCACCCTCA ACCCGGGCGA GACACAGCCG
ATCGCGTTCT ACAGTGACCG CACCTACCTG TTCGAGACCC ACACCGGAGA GCGACTGCGA
TGA
 
Protein sequence
MSDLVLRDVR KTYRTKGRPE VEAVRGFDLE VNSGELVGLL GPSGCGKSTT LRMIAGLEDV 
TGGDIAVGGR SMVGLPPQKR SIGVAFENYA LYPPLTVAEN IAFGMRARGH RKAERAARVA
DVAGRIGLSD ILDAHPAGLS SGQKQRVALA RAVAREPEVL LLDEPLSHLD AAQRDVTRRE
LRHLQQELGY TTILVTHDQE EALSLADRVV VMNDGVVQQV GTPDVIYDDP VNLFVAQFVG
EPAMNILDGR LDDDGVRLSP DLTIPVRTRE PRHDRAVTVG VRPEDVTLTG AAEAHATGTV
VVYEDLQEYG LATIELPGVD TRVVAQTAPG LTLNPGETQP IAFYSDRTYL FETHTGERLR