Gene Snas_4065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4065 
Symbol 
ID8885266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4343176 
End bp4344879 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content65% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003512810 
Protein GI291301532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.783415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC GCAATCGTTT CGATCCGCGA CGGCGTGCGG ATACGATCGC TGAGCTCAGC 
GATCGCGAGT TCGATCTCAT TGTCATCGGT GGCGGTATCA CCGGCGTGGG AACGGCTTTG
GATGCCGTCA GTCGGGGTTT GAGCGTGGCG CTGTTGGAGG CTGGGGATCT CGCGGCTGGG
ACTTCTTCGC GTTCCGGGAA GGTGTTCCAT GGTGGACTGC GGTACTTGCA GCAGTTGAAC
TTCTCGCTGG TTCGCGAGGC GTTGAAGGAA CGCGATCTCA TGGTGGATCG GCTGTGCCCG
CACTTGGTGT CGCCGGAGCT GTTCACGTTT CCGTTCACGC GTCGCTGGCA GCGTCCTTAC
GTCGGCGCGG GAGTGTTGTT GTATGACCTG TTGCGGCTCA CGGGAACCCG CAGTGTCGGT
GGGCACCGGC ACTTGAGCCG CAAGGGGGTA TTGCGCAAGC TCCCGGGCTT GAAGCCCAAG
CCGTTGACCG GCGGGGTTTC GTATTACGAC GTCCGGGTTG ACGATGCCCG GCACACCATG
ACGGTGGCTC GCACCGCCGC TGGGCTTGGC GCTCGGATCG TCACGCGGGC CGAGGTCACG
GGCATCGTCC GGGACGGCGA GACCGTCATT GGCGTTGTAG TGCGGGACAA GGAGAACGAC
ACCGAGTTCA CCGTGCGTGG GCGGTCGGTG GTTTCCGCGA CCGGCGTGTG GGCCGAGGGC
GTGCAGGCGC TGGCGGGGGA GTCTTCGATC GCGGTGACGG CGGCGAAGGG GATTCATCTT
GTCGTGCCCG CCGATCGGAT TGACGCTGAC AGTGGACTCA TCGCTCAGAC TGACGACAGC
GTGTTCATTA TTCGACGCTG GTTCGACTAC TGGCTGATGG GTACGACGGA CACGGCTTGG
GATCACGAGC GCGACGACCC CGCCGCTACT GGTGCGGACG TTGATTACCT GTTGGCGCAA
GCGAATCGGT GGCTGAAACG GCCGCTGAGT CGCGAGGACG TCGTGGGCGT TTACGCGGGC
TTGCGGCCGT TGGTCAGTGG ACGGAAAGGC GCGACGGCTG CGCTGTCGCG GGACCACACC
GTGATGGCTG GTCCGCGTGG GATGTTCACC GTCGTGGGCG GCAAGTACAC GACGTACCGG
ATCATGGCGC GTGATGCCGT GAATGCCGCT GTGGGGCACC TTGGCTCCGA TACTCCCGAT
TCGGCCACGG ACAAGCTGCC GATCCTGGGC GCGGACGGCT ATCGAGCCTT GCGAAACCAG
CGCCTGGCGC TGGCGGCGGA GGCTGGTTTG GATCCGGAGT GGATCGACCA TCTGTTGGGC
CGCTACGGGA CGCTTGTCCT CGACCTGCTG GAGCTGATGG CTGAGCGTCC CGAACTGGCT
AAGCCGGTGG AGGGGGCGCC GAAGTACCTG GCGGCGGAGC TATATTACGC GGCCAGCCAC
GAGGGTGCGT TGCATCTGGA CGATGTGCTG GTGCGGCGGA CCCGGATCTT CATGGAGACG
CCGGATCATG GTGAAGCCGC TGCAGTGCAC GCGGCGGCGA TCGTGGGCGA AGTGCTGGGC
TGGGATGAGC GGCGGCAGGC CGACGAGGTG GAACGGTATC GGCTGGAGCG GGAGGCCGAC
CGTCGCGCGG TCGACGCGCT GACCGATGAC GACGCGATGA CGGCTCGCAG ATCCGCTCGT
GCCGAGGCAA AGCCGCGGAC ATGA
 
Protein sequence
MSARNRFDPR RRADTIAELS DREFDLIVIG GGITGVGTAL DAVSRGLSVA LLEAGDLAAG 
TSSRSGKVFH GGLRYLQQLN FSLVREALKE RDLMVDRLCP HLVSPELFTF PFTRRWQRPY
VGAGVLLYDL LRLTGTRSVG GHRHLSRKGV LRKLPGLKPK PLTGGVSYYD VRVDDARHTM
TVARTAAGLG ARIVTRAEVT GIVRDGETVI GVVVRDKEND TEFTVRGRSV VSATGVWAEG
VQALAGESSI AVTAAKGIHL VVPADRIDAD SGLIAQTDDS VFIIRRWFDY WLMGTTDTAW
DHERDDPAAT GADVDYLLAQ ANRWLKRPLS REDVVGVYAG LRPLVSGRKG ATAALSRDHT
VMAGPRGMFT VVGGKYTTYR IMARDAVNAA VGHLGSDTPD SATDKLPILG ADGYRALRNQ
RLALAAEAGL DPEWIDHLLG RYGTLVLDLL ELMAERPELA KPVEGAPKYL AAELYYAASH
EGALHLDDVL VRRTRIFMET PDHGEAAAVH AAAIVGEVLG WDERRQADEV ERYRLEREAD
RRAVDALTDD DAMTARRSAR AEAKPRT