Gene Snas_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4042 
Symbol 
ID8885243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4311364 
End bp4312455 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512787 
Protein GI291301509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00590442 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGACC GACGCCAGGT ACTGCGATTT CGCGTCCACG CCCAGCAGCT CGACCGCACC 
AGCGGCGGAC TGGCCGACAC CACCGTCCTC GACTTCGGCG TCCAGGAGAC CGGCCCCGAC
GGAGCGGGCT GGGCGCTGGC GATCCGTGGC GTCGACGTCG CCAACCTCGC CGCGACGGAT
CTCATCACAC TGTGGACCCT GCGGGGAGCG CCCCACCGCT ACCGCCGCGC CGATGCCCCC
GACGTGGCCG CGGCGGTGGC CCCGTACTCC GACGCCGACG CGGGCAAACG CATCTTCGAC
GCCTCGAAAC CGTTGAAGGC GGCCGGAATC GGCAACGTGG AGGCACTGGA CGAAGTGGCC
GGACAACTGC GCCGCCTCGT CACCGAACCG ATGGTCAAGG GAGACGTGTC GGGACGGCTC
AACAAGGTTC TGGACGAGCC GTATCTGCGG TTCTGCCGCC CTTGCGACGC GATCCACATC
TACGAGCAGC CGTTTCGGCT GGCGGCGATC CGCGCCGGGC TGGAGCTGCG ACCGGGGACC
TCGCCGCCGG TACTGGAGCC GATCCCCGGG TTCAAGCCGT CGGCCACGGC GGACGAACGC
TTCGACCTGG TGCGCTGCTA CCTGCGACTG CTGGGCCCGG CGACACCGAA ACAGGTCGCC
GAGTTCCTGG ACGCGCCGGT CAAGGACGTG AAGGCGCACT GGCCCGAGGA CGTCGTGGCG
GTGACGGTGG ACGGCGAGGA GCGCTGGCTG CTGGCGTCCG ATGAGGAGGC TCTGCGATCG
GCGGCGGGTA AGGCGACGCG GCTGCTCGGG CCATACGACC TGTTCCTACA GGGACGGGAC
CGCGCCACGA TCCAGCCGGA CAAGGCGCGG GCCAAGGAGC TGTGGCCGGT ACTGGGACGG
CCGGGCGCGG TGCTGGTGGA CGGCGAGCTC GTCGGGGCGT GGCGGCCCCG TAAGTCCGGC
AAGCGGATGA GCGTAACCGT CAAACCGTGG CAGACCATCG CCGCCGCCAC CCGCAAGGCC
ATCAGCGAGC AGGCCGAGCG GCTGGCGGCG AATCGCGGGG CGGAACTGTC CACGATCGAG
TTCGACGACT GA
 
Protein sequence
MTDRRQVLRF RVHAQQLDRT SGGLADTTVL DFGVQETGPD GAGWALAIRG VDVANLAATD 
LITLWTLRGA PHRYRRADAP DVAAAVAPYS DADAGKRIFD ASKPLKAAGI GNVEALDEVA
GQLRRLVTEP MVKGDVSGRL NKVLDEPYLR FCRPCDAIHI YEQPFRLAAI RAGLELRPGT
SPPVLEPIPG FKPSATADER FDLVRCYLRL LGPATPKQVA EFLDAPVKDV KAHWPEDVVA
VTVDGEERWL LASDEEALRS AAGKATRLLG PYDLFLQGRD RATIQPDKAR AKELWPVLGR
PGAVLVDGEL VGAWRPRKSG KRMSVTVKPW QTIAAATRKA ISEQAERLAA NRGAELSTIE
FDD