Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4042 |
Symbol | |
ID | 8885243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4311364 |
End bp | 4312455 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003512787 |
Protein GI | 291301509 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00590442 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCGACC GACGCCAGGT ACTGCGATTT CGCGTCCACG CCCAGCAGCT CGACCGCACC AGCGGCGGAC TGGCCGACAC CACCGTCCTC GACTTCGGCG TCCAGGAGAC CGGCCCCGAC GGAGCGGGCT GGGCGCTGGC GATCCGTGGC GTCGACGTCG CCAACCTCGC CGCGACGGAT CTCATCACAC TGTGGACCCT GCGGGGAGCG CCCCACCGCT ACCGCCGCGC CGATGCCCCC GACGTGGCCG CGGCGGTGGC CCCGTACTCC GACGCCGACG CGGGCAAACG CATCTTCGAC GCCTCGAAAC CGTTGAAGGC GGCCGGAATC GGCAACGTGG AGGCACTGGA CGAAGTGGCC GGACAACTGC GCCGCCTCGT CACCGAACCG ATGGTCAAGG GAGACGTGTC GGGACGGCTC AACAAGGTTC TGGACGAGCC GTATCTGCGG TTCTGCCGCC CTTGCGACGC GATCCACATC TACGAGCAGC CGTTTCGGCT GGCGGCGATC CGCGCCGGGC TGGAGCTGCG ACCGGGGACC TCGCCGCCGG TACTGGAGCC GATCCCCGGG TTCAAGCCGT CGGCCACGGC GGACGAACGC TTCGACCTGG TGCGCTGCTA CCTGCGACTG CTGGGCCCGG CGACACCGAA ACAGGTCGCC GAGTTCCTGG ACGCGCCGGT CAAGGACGTG AAGGCGCACT GGCCCGAGGA CGTCGTGGCG GTGACGGTGG ACGGCGAGGA GCGCTGGCTG CTGGCGTCCG ATGAGGAGGC TCTGCGATCG GCGGCGGGTA AGGCGACGCG GCTGCTCGGG CCATACGACC TGTTCCTACA GGGACGGGAC CGCGCCACGA TCCAGCCGGA CAAGGCGCGG GCCAAGGAGC TGTGGCCGGT ACTGGGACGG CCGGGCGCGG TGCTGGTGGA CGGCGAGCTC GTCGGGGCGT GGCGGCCCCG TAAGTCCGGC AAGCGGATGA GCGTAACCGT CAAACCGTGG CAGACCATCG CCGCCGCCAC CCGCAAGGCC ATCAGCGAGC AGGCCGAGCG GCTGGCGGCG AATCGCGGGG CGGAACTGTC CACGATCGAG TTCGACGACT GA
|
Protein sequence | MTDRRQVLRF RVHAQQLDRT SGGLADTTVL DFGVQETGPD GAGWALAIRG VDVANLAATD LITLWTLRGA PHRYRRADAP DVAAAVAPYS DADAGKRIFD ASKPLKAAGI GNVEALDEVA GQLRRLVTEP MVKGDVSGRL NKVLDEPYLR FCRPCDAIHI YEQPFRLAAI RAGLELRPGT SPPVLEPIPG FKPSATADER FDLVRCYLRL LGPATPKQVA EFLDAPVKDV KAHWPEDVVA VTVDGEERWL LASDEEALRS AAGKATRLLG PYDLFLQGRD RATIQPDKAR AKELWPVLGR PGAVLVDGEL VGAWRPRKSG KRMSVTVKPW QTIAAATRKA ISEQAERLAA NRGAELSTIE FDD
|
| |