| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4017 |
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| Symbol | |
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| ID | 8885218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 4285641 |
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| End bp | 4287248 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512762 |
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| Protein GI | 291301484 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00126088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGT TCGAATTTGG TCTTTTAGGA GCCCTAACGG CGCGGGTGAA CGGCCATGAC
GCACCCTTGG GAGGCCTCAA GCCCCGCCGG ATGCTCGCCA CCTTCCTGTT GATGCCCGGT
GAACAGCTGC CACTGGACCG GTTCATCGAC GTGGTGTGGG GTGCCCAGCC CCCCAAATCG
GCGAGCGCGA ACCTTTATTC CTATGTGACC GTCCTGCGGC GTGCGCTGCA CGGACGACTG
AACCGGCTGC GTAGCGGGTA TGTGCTGCAC GTCAAACCGG GCGAGCTCGA CGTCCAGGTC
TTCACCGACC TGCTCGTGGA GGCCCGCAGC GAGGCCGCCG CCGGCCACGT CGCCGATTCG
CTGGGTGCCT ATGACCGTGC GTTGAAATTG TGGCGTGGTG AGCCGCTGGC CGATATCAAA
GGGCCACCGC CATGGATTCC ATATATCCAA AAGTTGATAG ACACACGCCT TGACGCTCTT
GAGGAACGTG CCGCTCTTTA TGTTCATAAC GGACAGCAGA ATGAGGCGGT CGCGGAACTT
CGTGGTCTGA TCGCGGAACA TCCGCTCCGA GAAAGTCTAT GGCGGCAGTT GATGACCGCA
TTGGCCAGTG CCGGGCAGCG TGCCGAAGCC ATCGACACGT ACGGGCGATT GCGCTCGACA
CTCGCCGACG AACTGGGCAT CGAACCCAGC GAGGAGTCAC AGCAGGTACA TCGCAAACTA
CTCGGCGCAC CCACAGCCCG ATCCCGGCAT ACGGACGTGC GCACCGCCGA GTTGAAACGC
CGGTGCACCG ACATGGAGGC CATGGTCCGC GCGGCCGCGG CCACCCTGCC GGTCAGCGCG
ATGTCCATGA CCACCCCGGG ACAGACCGAC GCCGACATAC CGGCGCCGGA CAACCCGGGG
GCCTGGCTCG AGGACAACGT GGACGACATC CTGGCGCTGG TGCGTCAGGC CGCCACGGCG
GGTCTGGCGT CCTCGGCGTG GCGGCTGAGC GCGGCCATGC TGCCGTTCCT GGATTTCCGG
ATGCGGCTCG AGGACTGGCG GCGGTGCGTG CGGATCGCGC TGGTCGCGGC CCGCAAGTGC
GGTGACACCG AGGGCGAGGC CACGATGTTG CGCAGTCTCG GTCAGTGGCA CATCTACCAC
GACCACTTCG AGGCGGCCGA GGAGTGCTTC AACGTGGCCC GGGTGCTGAC CCGGGCGCTG
GGCAACGAAC GCGAGACCGC CCTGGCGGTC TACGGACTGG GCGCCGTGGC CCGGTTCACC
GGGCGCACGC CCGAGGCGGC CTCGTTGTTC CGCGACTCCG CCAACGCCCT GCACTCCATT
GGAGACGCCT ACGGTGAGAG CTACGCCCGC TGGGCGCTGG CCGGGGCCTT CATCGAGCTG
GGCAACATCG ACGGCGCCGA GGAGCAGCTC AACACCGCGC TGAAGTCGGC GCGTTCGGTC
GGCGACCGGC ACCGCGAAGG CCATGTGCTG GAGCGGTTCG CGGCGGTCTA CCGGGCCCGC
GGCAACGATT CCGAGGCGAT CTCCTGTCTG GAGGACGCGC TGGAGATTTT CACTGAACTG
GGCGACGTGC CCTGTACGAC CGGGGTCAAG GAGGCCCTGG CGGTGTGA
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| Protein sequence | MPEFEFGLLG ALTARVNGHD APLGGLKPRR MLATFLLMPG EQLPLDRFID VVWGAQPPKS
ASANLYSYVT VLRRALHGRL NRLRSGYVLH VKPGELDVQV FTDLLVEARS EAAAGHVADS
LGAYDRALKL WRGEPLADIK GPPPWIPYIQ KLIDTRLDAL EERAALYVHN GQQNEAVAEL
RGLIAEHPLR ESLWRQLMTA LASAGQRAEA IDTYGRLRST LADELGIEPS EESQQVHRKL
LGAPTARSRH TDVRTAELKR RCTDMEAMVR AAAATLPVSA MSMTTPGQTD ADIPAPDNPG
AWLEDNVDDI LALVRQAATA GLASSAWRLS AAMLPFLDFR MRLEDWRRCV RIALVAARKC
GDTEGEATML RSLGQWHIYH DHFEAAEECF NVARVLTRAL GNERETALAV YGLGAVARFT
GRTPEAASLF RDSANALHSI GDAYGESYAR WALAGAFIEL GNIDGAEEQL NTALKSARSV
GDRHREGHVL ERFAAVYRAR GNDSEAISCL EDALEIFTEL GDVPCTTGVK EALAV
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