| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4016 |
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| Symbol | |
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| ID | 8885217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4283854 |
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| End bp | 4285341 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_003512761 |
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| Protein GI | 291301483 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00414729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGGAT TCCCGCGCCC CGAGACCGTG ACACCGATAC CGCTGGCCGC CCTGGCGCGG
CTGCTGTCGG TCCCGGTCGA CGCCGAGCCG GGCCGGGTCG AGGTGACCGG CGTCAGTCTG
GCCTCGGCAC GGGTACGCCC CGGTGACCTG TACGTGGCGG TGCCCGGTGC CCGACGACAC
GGCGCCGAGT TCCTCGCCGA GGCCGTCGAA CGCGGCGCCG TGGCGGTGCT GTCCGACTCC
TGGGGGGTCG AGGCCGCCGT CGAACACGGC CTGCCCGCGC TGCACCACCC CGACCCGCGC
GCCGCCGCCG GGGTCGTGTC CTCGGCCGTG TACGGCGAAC CCACGAAACG GCTGTCGGTC
ATCGGCATCA CCGGCACCAG CGGCAAGACC TCCACCGCCT ACCTCGTCGA GGCCGGACTC
AAGGCCGCCG GACGCGTCAC CGGCCTGATC GGCACCGTCG AGACCCGCAT CGGCGCCGAG
ACCATCGTCT CCGAACGCAC CACCCCCGAG GCCACCGAAC TGCAGGCGCT GTTCGCCTAC
GCCCTGGAAC AGGGCGTCAC CGACATCGTC ATGGAGGTCT CCAGCCACGC GCTGACCCTG
CACCGCGCCG AGGGCATCTC CTTCGCCGTG GGCGGCTTCA CCATGTTCGG CCTCGACCAC
CTCGACTTCC ACCCCACAGT GGACGAATAC TTCGCCGCCA AGGCGAAACT GTTCGACGGC
CGCTGCCGCG TCGAGGTCGT CAACGCCGAC GACGCCTGGG CCAAACGCCT GGTCACACCC
GACACCGTCA CCTACTCGCT CGTCGACGCC AACGCCACCT GGTCGGTGGA CTCCATCACC
GGTTCCGGCT TCGACCAGTC CTTCGAGGTC ACCAGCCCGC ACGGCCGCCA CCACGGCTCG
GTGCGGCTGC CCGGCCGCCA CAACATCGCC AACGCGCTGC TGGCCTACGG CTGCCTGACC
GCCGTGGGCG TCCCGGTCGA GACCGCCATC GCCGGGGTCG CCGACTGCGC CGGGGTCCCG
GGCCGGATGG AACTGGTCTC CGAGGACAAC CCGGTGCACG GCGTCGTCGA CTACGCCCAC
AAACCCGACG CGATCACCGC GGTGCTGGAA GCCCTGCGCC CCATCACCTC CGGCTCCCTC
ATCGCCGTCA TCGGCGCCGG CGGCGACCGC GACCCGTCCA AACGCACCCT GATGGGCGAC
GCCGCGGCCC GCGCCGCCGA CCTGGTCATC GTCACCGACG ACAACCCGCG CACCGAGGAC
CCGGCGGCGG TACGCGCCGG GGTCCTGGCC GGAGTCGGCG ACCGGCCGCA CCTGGAAGTG
GCCGACCGCG CCACCGCCAT CGATGAGGCC GTAGCCCGCG CGAAGCCAGG CGATACCATC
GCGCTGCTTG GAAAAGGCCA TGAATCGGGC CAGGAACTCG CCGACCGGGT CCTGCCCTTC
GACGACCGGC GTGTCCTCGC CGACGCCCTG TCCGCCGCCC GCCCGTAA
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| Protein sequence | MLGFPRPETV TPIPLAALAR LLSVPVDAEP GRVEVTGVSL ASARVRPGDL YVAVPGARRH
GAEFLAEAVE RGAVAVLSDS WGVEAAVEHG LPALHHPDPR AAAGVVSSAV YGEPTKRLSV
IGITGTSGKT STAYLVEAGL KAAGRVTGLI GTVETRIGAE TIVSERTTPE ATELQALFAY
ALEQGVTDIV MEVSSHALTL HRAEGISFAV GGFTMFGLDH LDFHPTVDEY FAAKAKLFDG
RCRVEVVNAD DAWAKRLVTP DTVTYSLVDA NATWSVDSIT GSGFDQSFEV TSPHGRHHGS
VRLPGRHNIA NALLAYGCLT AVGVPVETAI AGVADCAGVP GRMELVSEDN PVHGVVDYAH
KPDAITAVLE ALRPITSGSL IAVIGAGGDR DPSKRTLMGD AAARAADLVI VTDDNPRTED
PAAVRAGVLA GVGDRPHLEV ADRATAIDEA VARAKPGDTI ALLGKGHESG QELADRVLPF
DDRRVLADAL SAARP
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