Gene Snas_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3939 
Symbol 
ID8885139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4202553 
End bp4203371 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content73% 
IMG OID 
Product6-phosphogluconate dehydrogenase NAD-binding protein 
Protein accessionYP_003512685 
Protein GI291301407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00646909 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA CGGCGATATT GGGACAGGGA CGCATGGGCG CCGCGATGGC GGCGCGGCTG 
CGCGAACACG ACGCCGACGT GAGGGTGTGG AACCGCGATC CGGCGCGCTG CGAGGCGGCC
CGCGCGGCCG GGGCCACCGT CGCGGCCAGC GCCGCCGAAG CGGTCACCGA AGCCGATCTG
GTGCTGGTCA TGCTGGCCGA CGGCCCGGCG GTGGCCGAGG TGCTGGCCGA GGTGGTCCCG
GCGCTCGGAA GCGAGGCGGT GGTGGTCCAG ATGTCCACCA TCTCGCCGGA CGAGACCCGG
GCGCTGGCCG CGAAACACCA CGCACTGCCG CTGTTGGACG CGCCGGTCAA GGGCAGCGTG
CCGCAGGTGC TGGCGGGATC GCTGGCGATC CTGACGGCGG GCGCCAAGTC CGACGTGGAC
CGGGCCCGTC CGGTGCTGGA GCACCTGGGA ACGATCGTCG ACTGTGGCGC GATCGGCGGC
GGTTCGGCGG CCAAACTCGT CGTCAACGCC GCGATGATCG CCACCGCGAC GGTGCTGGCG
CAAAGCTTCG CGCTGGCCGC CCAGCTGGGT CTCGACGAGG CCGCCACCCG CGAACTGCTG
TCACAGACCC CGTTGAGCCC GGCCCTGCGG CGCTACGACC CCGACGGCGG CGACTTCCCG
GTCTACCTGG CCGCCAAGGA CGTCCGGCTG GCCCACGAGT CCGCCGAGGG CCTCGCGGTC
TTCCAGGCCG TGGAGGCCCA CCTCAACCAG GTCGCCGAAT CCGACGCACA GGCAGGACTG
TGGACGGTCG TGCGTCAGGC CGTCGCGACC TTCGAATAA
 
Protein sequence
MPTTAILGQG RMGAAMAARL REHDADVRVW NRDPARCEAA RAAGATVAAS AAEAVTEADL 
VLVMLADGPA VAEVLAEVVP ALGSEAVVVQ MSTISPDETR ALAAKHHALP LLDAPVKGSV
PQVLAGSLAI LTAGAKSDVD RARPVLEHLG TIVDCGAIGG GSAAKLVVNA AMIATATVLA
QSFALAAQLG LDEAATRELL SQTPLSPALR RYDPDGGDFP VYLAAKDVRL AHESAEGLAV
FQAVEAHLNQ VAESDAQAGL WTVVRQAVAT FE