Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3939 |
Symbol | |
ID | 8885139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4202553 |
End bp | 4203371 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | 6-phosphogluconate dehydrogenase NAD-binding protein |
Protein accession | YP_003512685 |
Protein GI | 291301407 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00646909 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCA CGGCGATATT GGGACAGGGA CGCATGGGCG CCGCGATGGC GGCGCGGCTG CGCGAACACG ACGCCGACGT GAGGGTGTGG AACCGCGATC CGGCGCGCTG CGAGGCGGCC CGCGCGGCCG GGGCCACCGT CGCGGCCAGC GCCGCCGAAG CGGTCACCGA AGCCGATCTG GTGCTGGTCA TGCTGGCCGA CGGCCCGGCG GTGGCCGAGG TGCTGGCCGA GGTGGTCCCG GCGCTCGGAA GCGAGGCGGT GGTGGTCCAG ATGTCCACCA TCTCGCCGGA CGAGACCCGG GCGCTGGCCG CGAAACACCA CGCACTGCCG CTGTTGGACG CGCCGGTCAA GGGCAGCGTG CCGCAGGTGC TGGCGGGATC GCTGGCGATC CTGACGGCGG GCGCCAAGTC CGACGTGGAC CGGGCCCGTC CGGTGCTGGA GCACCTGGGA ACGATCGTCG ACTGTGGCGC GATCGGCGGC GGTTCGGCGG CCAAACTCGT CGTCAACGCC GCGATGATCG CCACCGCGAC GGTGCTGGCG CAAAGCTTCG CGCTGGCCGC CCAGCTGGGT CTCGACGAGG CCGCCACCCG CGAACTGCTG TCACAGACCC CGTTGAGCCC GGCCCTGCGG CGCTACGACC CCGACGGCGG CGACTTCCCG GTCTACCTGG CCGCCAAGGA CGTCCGGCTG GCCCACGAGT CCGCCGAGGG CCTCGCGGTC TTCCAGGCCG TGGAGGCCCA CCTCAACCAG GTCGCCGAAT CCGACGCACA GGCAGGACTG TGGACGGTCG TGCGTCAGGC CGTCGCGACC TTCGAATAA
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Protein sequence | MPTTAILGQG RMGAAMAARL REHDADVRVW NRDPARCEAA RAAGATVAAS AAEAVTEADL VLVMLADGPA VAEVLAEVVP ALGSEAVVVQ MSTISPDETR ALAAKHHALP LLDAPVKGSV PQVLAGSLAI LTAGAKSDVD RARPVLEHLG TIVDCGAIGG GSAAKLVVNA AMIATATVLA QSFALAAQLG LDEAATRELL SQTPLSPALR RYDPDGGDFP VYLAAKDVRL AHESAEGLAV FQAVEAHLNQ VAESDAQAGL WTVVRQAVAT FE
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