| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3927 |
|---|
| Symbol | |
|---|
| ID | 8885127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4193031 |
|---|
| End bp | 4193687 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003512675 |
|---|
| Protein GI | 291301397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.69466 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGTC GGACCCAAGG TCAACGCGCG GGCCTGACCC GGCAGGCGAT CCTGGACGCC
GCGCTGCGAC TGGCCGACCG CGAGGGGCTC AAGGCGCTGT CGATGCGCCG TCTGGGCGCC
GAACTGGGGG TGGAGGCCAT GACGCTCTAC CACCACATCC CGAACAAGGA CGCGCTCCTG
GACGGCCTGG TCGAGCAGGT CGTCACGCTC GCCGAGGCAC CCCGGTTCGG GCAGGCGCGG
TGGCCCGACG TGTTGCGCGA CTACGCCCGG TCGCTGTTGG ACACGCTGTT GGCCCATCCG
GCGGTGCTGC CGCTGGTCGC CACCCGTCCG GCGACCACCC CCGCGAACCT GCGCATGGTC
GAGGCGACCC TGGAAGCGTT GTGCCGGGAC GGTTTCACGC CCGACGAGGC GCTGGCCGTC
GTCTACTCGA TGACCGGCTT CGTCGTCGGA CAGGCCACGG CCCTGGCCCA GGCCGCCCAC
GACGACGCCC AGCACACCCG GGGGCAGCTG GAGCAGCTGT CCGCACTGGA CGAATCCGAG
TACCCGCTGC TGGCGCGGGC CGCGCGCGAG GCCGGGGCGG CGCGGTCGCG GTTCGACTTC
GCGCTGGACG CGATGCTGAC CGGATTCGAC GTGGCGCTGC GGCGCGAGGG TGACTGA
|
|---|
| Protein sequence | MAGRTQGQRA GLTRQAILDA ALRLADREGL KALSMRRLGA ELGVEAMTLY HHIPNKDALL
DGLVEQVVTL AEAPRFGQAR WPDVLRDYAR SLLDTLLAHP AVLPLVATRP ATTPANLRMV
EATLEALCRD GFTPDEALAV VYSMTGFVVG QATALAQAAH DDAQHTRGQL EQLSALDESE
YPLLARAARE AGAARSRFDF ALDAMLTGFD VALRREGD
|
|---|
| |