Gene Snas_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3897 
Symbol 
ID8885097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4163658 
End bp4164641 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003512645 
Protein GI291301367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0754434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGCA GGACCATCGC GATCCACCAC GTCAACGCCG CGCTGCGCGG CGCCCGCGCC 
AGCGGTCTGG ACGTGGAGCC GGTGCTGCGT GCCGCCGGAA TCCCGCCGCG CCTGTGCGAG
GAGGAACGCG CCCGCGTCAC CCCCGACCAG TTCACCCGCC TGATCCAGGG GCTGTGGCTG
GCGATGGACG ACGAGCTGAT GGGCTTCGGG CCGCAGCCGT CGCGGCGCGG CACCTTCGCC
ATGATGTGCC ACGCCACCAT CGGTTGCCGC AGCCTCGGGC ACGCCCTGCG CCGGGGCACC
GCGTTCTATG CCCTGTTTCC CGGCGCGCCC CGGGTGGCCA TCGACCGGGG CGACGGCCGG
GCCGCGATGA GCTTCGCGCT GCCCGGCTTC GACGACCCCG ACCACTTCCT CACCGAGTCG
CTGCTGGTCA TCTGGCACCG TTACTCCAGC TGGGCCATCG GACGCCGCAT TCCGCTGGAC
GGCCTCGACC TGGCGTATCC GGCGCCGTCG CACGCGGCCG AGTACGACCT GATGTTCGGC
TGCCCGCTGC GGTTCGGCGC CCCGACCACC GTGCTGACCT TCGCCGAGCG CTACCTGGAC
TATCCACTGT TGCAGGACGA GGCGAGCCTG CGGGTGTTCC TGCGGGACTC CCCGGCCGAT
CTGCTGGGGC GCCGCGACTA TGACTCCAGT GTCGGGGAAC AGGTGCGGCG CATGCTGACC
CATGGAACCA CCACACTGGA CGCGGCTGCC GCGCGGCTGG CGGTCAGCCC GCAGACGCTG
CGGCGTCGGC TCGCCGCCGA GGGGACCTCG TTTCGGGCGC TGAAGGACCA GTTGCGCCGC
GACGCCGCGA TCGAGGCGCT GAGCCGGGGC GATGAGTCGA TAGAGGATTT GGGGCGACGG
CTGGGGTTCT CCGAGGCCAG TGCTTTTCAT CGGGCGTTTC GGCGCTGGAC CGGGGACTCG
CCGGGGTCGT ATCGGGGTCG CTAG
 
Protein sequence
MSGRTIAIHH VNAALRGARA SGLDVEPVLR AAGIPPRLCE EERARVTPDQ FTRLIQGLWL 
AMDDELMGFG PQPSRRGTFA MMCHATIGCR SLGHALRRGT AFYALFPGAP RVAIDRGDGR
AAMSFALPGF DDPDHFLTES LLVIWHRYSS WAIGRRIPLD GLDLAYPAPS HAAEYDLMFG
CPLRFGAPTT VLTFAERYLD YPLLQDEASL RVFLRDSPAD LLGRRDYDSS VGEQVRRMLT
HGTTTLDAAA ARLAVSPQTL RRRLAAEGTS FRALKDQLRR DAAIEALSRG DESIEDLGRR
LGFSEASAFH RAFRRWTGDS PGSYRGR