Gene Snas_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3885 
Symbol 
ID8885085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4152468 
End bp4152989 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content68% 
IMG OID 
Productpeptide deformylase 
Protein accessionYP_003512633 
Protein GI291301355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0724077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.763087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA CCGAGTCGGG AACCGTGCAC GACATCGTGT ACCACGGCAC CGAGGTGCTG 
CACCGTCGTT GTAGGACGGT CACCGACTTC GACGACGAGC TGGCGCGGCT GGTCGACGAC
ATGTTCGCCA GCATGTACGC CGCCAACGGG GTGGGCCTGG CGGCCAACCA GATCGGCGTC
GACGCGCGGG TGTTCGTCAT CGACTGCCGC GACGACGACG GCGGTCGCCT GTACGGCCAC
ATCGTCAACC CGACGCTGCG CGAGGAACCG CCGCCGCGCG AACTCAACGT CGGCCCCGAA
GGCTGCCTGT CGGTGCCCGG CCAGTACGCC GACGTGGCCC GCACCCAGAC CGCCACCGTC
GACGGCTTCG ACAAGACCGG CAAGCCGATC ACCCTCACCA GCACCGGCGA GGCCGCCCGG
TGCCTGCAAC ACGAGACCGA CCATCTCAAC GGCATCGTCT ACGTGGACAA GCTGCCCAAG
AAGATCCGCA AGCGCCTGCT CGCCGAGGCC GGACTGGGCT GA
 
Protein sequence
MTETESGTVH DIVYHGTEVL HRRCRTVTDF DDELARLVDD MFASMYAANG VGLAANQIGV 
DARVFVIDCR DDDGGRLYGH IVNPTLREEP PPRELNVGPE GCLSVPGQYA DVARTQTATV
DGFDKTGKPI TLTSTGEAAR CLQHETDHLN GIVYVDKLPK KIRKRLLAEA GLG