Gene Snas_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3844 
Symbol 
ID8885044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4105615 
End bp4106292 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003512593 
Protein GI291301315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA TACTGGAAGC GACCGACGTC CACAAGAGCT TCGGCCCCAC CCACGCACTG 
GCGGGAGCTC ACATGAGCGT CTCCCCCGGC GAGGTGTTGG CGATCATGGG GCCGTCCGGC
TCCGGAAAGT CCACCCTGCT GCACTGCGCG GCCGGGATCC TGCCCGCCGA CTCCGGGCGC
ATCATGTACG GCGGCCGCGA CCTGACGGCC ATGTCCGACG GCGAACGCAG CCAGCTGCGC
CGCAGCGAGT TCGGCTTCGT GTTCCAGTTC GGACAGCTGG TGCCGGAACT GACCTGCCTG
GAGAACGTCG CGCTGCCGCT GCGCATGAAC GGCGTCAAAC GCCGCGAGGC CGAGCGCCGC
GCCGCGCAGT GGCTGGAACG GCTGGAGATC GGCGACGTGA CCAAGAAACG CCCAGGTGAG
GTCTCCGGCG GCCAGGGACA GCGGGTCGCG GTGTCGCGGG CACTGGCCAT CGAACCGCGG
GTCGTGTTCG CCGACGAACC GACCGGGGCG CTCGACTCGC TCAACGGCGA ACAGGTCATG
ACGCTGCTGA CCAAGGCGGC CAAGGAATCC GGCGCCGCCG TGGTGCTGGT GACCCACGAG
GCCCGGGTGG CCGCGTACTC CGACCGCGAG ATCGTCGTGC GCGACGGCAA GACCCGCGCC
CCGGAGTTCG CCGTATGA
 
Protein sequence
MTAILEATDV HKSFGPTHAL AGAHMSVSPG EVLAIMGPSG SGKSTLLHCA AGILPADSGR 
IMYGGRDLTA MSDGERSQLR RSEFGFVFQF GQLVPELTCL ENVALPLRMN GVKRREAERR
AAQWLERLEI GDVTKKRPGE VSGGQGQRVA VSRALAIEPR VVFADEPTGA LDSLNGEQVM
TLLTKAAKES GAAVVLVTHE ARVAAYSDRE IVVRDGKTRA PEFAV