Gene Snas_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3825 
Symbol 
ID8885025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4083279 
End bp4083650 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content63% 
IMG OID 
Productpreprotein translocase YajC subunit 
Protein accessionYP_003512574 
Protein GI291301296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0618005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCG CCGTCATCAT CCTGCTGATG GTGGCCATGT ACTTCTTCAT GATCCGGCCG 
CAGAACAAGA AGCGCCGCGA AATCATGGAA AAGCAGCGCC AGGCCGGACC CGGCCAGACC
ATCGTCACGA TCGGCGGCCT GCACGCCACC ATCATCGACG CCGACAAGGA CACGGTGACC
CTTGAGGTCA GCCCCGGCGT CATGTGCGTC TACGAGCGCG GTGCCATCGC CCGCGTCGTC
GACGAGACGG TGGAGACCGA CCTGACCACT GACGATGACG ACTCCGAGGA CGAGAAGTCC
GAGGAGACCC CGGCCAGTGC GGTCGTGGAC ATGAAGGCCG ACAAGTCGTC CGGCGACGAC
TCTCGGAAAT AG
 
Protein sequence
MMPAVIILLM VAMYFFMIRP QNKKRREIME KQRQAGPGQT IVTIGGLHAT IIDADKDTVT 
LEVSPGVMCV YERGAIARVV DETVETDLTT DDDDSEDEKS EETPASAVVD MKADKSSGDD
SRK