| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3824 |
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| Symbol | |
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| ID | 8885024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4081207 |
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| End bp | 4083177 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_003512573 |
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| Protein GI | 291301295 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.221724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.729051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTCCGA AAAGCAAGGA GCTGCCCCGC AGACGCAAGA AGGTGGCGCG CAAGCAACTG
CGGGTAGCGC CCTATTTTGT GTCACTGCTG GTGGTCGCGG GGTTGTTGTG GCTGGCGGCC
TTCGCCGGCA CGGGCTTCAA GAGCTTCCCG ATCCCCAAGC TCGGCTTGGA CCTGCAGGGC
GGCATGACCA TGACCCTCAA GGCGTCGCTG CCCAACAACG GCACCCCCGA CGCCGCCCGG
CTGGAGCAGG CCCGCCAGAT CATCGAGGAC CGTGTCAACG GCACCGGTGT GGCCGAGCCC
GAGGTCTACG TCGAGGGCAG CGACCACATC GTCGTCAACG TCGCCGGTAA AGAGGCCAAC
GCCGAGAAAC TGCGCGAGGT CGGCGCCCCC GCCGAACTGC GGTTCCGCGA GGTCCTGGCG
GGCCCGGGTG AGGACTACAC CCAGCAGGAC CCCGAGGACT TCAAGAAGGA AACCCAGAAG
GACAAGGACG ACAAGGACAA GGACAAGGAG TCCGACAAGG ACTCCTCCGA CGAGGAGAAG
GCCGACAACC CCTCGGATGA CAAGTCCTCC AAGGACGACA AGTCCGAAAG CCCCTCCGAC
GACAAGTCCT CCAAGGACGA CGACAAGGAC AAGGGCGAGG ACCCGGCCGA CGTCGACAAC
TCCGTCAAGG AACAGCGCAA GAAGCTCGAG AAGAAGCTCG GCAAGGAACT GATCGGCGCG
GCCGAGCAGT TCGTGGCGCA GGCCGAGGCC ATGGTCAAGC AGGGCCAGCA GCTGTCGCCG
CAGATGTTCC CGCAGCTGGG TTACACCGAG GACTTCGCCA AGTTCGGCAA GCTGTCGCCC
GACGAGGTCG CGGTGCTGGC CCCGTCATGG CAGTACTACA TCCCCAACAT CGGCTGCGGC
CAGCTCAACG GCCGCACCCC CGGCGCGATC TCGGAGATCA AGGAGCAGGT CGTGGCCTGC
AACCGTCCCT CCGACGCCGA CATCAAGGCG GCCAAGAAGC AGAAGCAGTC CGCCTACACC
AAGTACCTGA TGGCCGAGGC CAAGGTCGTC GGCGAGGACA TCTCCAACGC CACGGTGCAG
CCGGACCAGC AGCAGGCCGG TGCCTACGCC GTGGGCATCA GCTTCACCGA CTCCGGCGCG
AGCAAGTGGA AGAAGCTCGC CACCGCCACC GTCGGCAAGA ACGTGTCGAT CGTGCTGGAC
AACGAGGTCG TCTCGGCGCC CACGATCGAG CAGGGCGCCG GAAGCGGCGG CTCGGTGGAG
ATCACCGGCG GCTTCTCCTC CGACGACGCC AACCTGCTGG CCGAGCAGCT GAAGTACGGT
TCGCTGCCCG CCTCGTTCAC CGTGGAGACC ATCGACGAGG TCTCGCCCAC CCTGGGCCTG
AGCCAGATGT ACGCGGGCCT GCTGGCCGGT GGCGTCGGTG TCGCCCTGGT GATCCTGTAC
TGCCTGGTCT ACTACCGACT GATGGGCTTC GTCGTCATCG TCAGCCTCCT GGTGTCCGGC
GCGGTCCTGT ACCCGGCGAT CTCGATGCTG GGCGCCCAGA TCGGCTTCAC GCTGACGCTT
GCCGGTGTCG CCGGATTCAT CGTGGCCATC GGTATCACCG CCGACTCCTT CGTGGTGTTC
TTCGAACGAT TGAAGGACGA GGTGAAGGAG GGCAGATCCT CCCGGAGCGC GGTTCCCCGG
GCCTGGACCC GGGCACGACG CACCATCCTG TCGGCCAACA CCGTCCAGAT CATCGGCGCC
CTGGTGCTGT ACTTCGTGGC CATCGGCGCG ATCAAGGGCT TCGCGTTCAC CCTGGGACTG
TCGACACTGT TCGACATCCT GGTCGTGTTC CTGTTCACCC ATCCGCTGGT GTCGTGGGTT
TCGCGGTCGA GGATTCTCGA CAATCCGTTC CTGTCGGGTC TGCACACCGG CCGTCGCCGT
ACCCCCGCGA GTGTTTCCGT CAGGGGCGCC GTGAGCCCGA AGGAGTCCTG A
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| Protein sequence | MGPKSKELPR RRKKVARKQL RVAPYFVSLL VVAGLLWLAA FAGTGFKSFP IPKLGLDLQG
GMTMTLKASL PNNGTPDAAR LEQARQIIED RVNGTGVAEP EVYVEGSDHI VVNVAGKEAN
AEKLREVGAP AELRFREVLA GPGEDYTQQD PEDFKKETQK DKDDKDKDKE SDKDSSDEEK
ADNPSDDKSS KDDKSESPSD DKSSKDDDKD KGEDPADVDN SVKEQRKKLE KKLGKELIGA
AEQFVAQAEA MVKQGQQLSP QMFPQLGYTE DFAKFGKLSP DEVAVLAPSW QYYIPNIGCG
QLNGRTPGAI SEIKEQVVAC NRPSDADIKA AKKQKQSAYT KYLMAEAKVV GEDISNATVQ
PDQQQAGAYA VGISFTDSGA SKWKKLATAT VGKNVSIVLD NEVVSAPTIE QGAGSGGSVE
ITGGFSSDDA NLLAEQLKYG SLPASFTVET IDEVSPTLGL SQMYAGLLAG GVGVALVILY
CLVYYRLMGF VVIVSLLVSG AVLYPAISML GAQIGFTLTL AGVAGFIVAI GITADSFVVF
FERLKDEVKE GRSSRSAVPR AWTRARRTIL SANTVQIIGA LVLYFVAIGA IKGFAFTLGL
STLFDILVVF LFTHPLVSWV SRSRILDNPF LSGLHTGRRR TPASVSVRGA VSPKES
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