Gene Snas_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3816 
Symbol 
ID8885016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4072992 
End bp4073357 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512565 
Protein GI291301287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00911141 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCCGA AATCGCGAGA TCCAGGATCT ACACCCGACG GTGCGTCGGC AAACGTCACC 
GTCCAAAACA GTCCGGAATT CGCCGCCTTG CGCAAAGCAT TGCGGCGCTT TGTGTTTCCG
GTGACGGTGG CGTTCCTGGC CTGGTACGCC CTGTACGTGT TGCTGTCGGC TTACGCGCGT
GGCTTCATGG CCTACAAGCT GGTCGGGCAC ATCAACGTCG GTCTGGTCTT CGGGGTGCTG
CAGTTCGTGA GCACCTTCCT CATCGCCTGG GCCTATTCCC GATACGCCGA CAAACACCTC
GACCCCAAGG CCGAGGCGAT CAAACGGCAC ATGGACGGCG AGGACGCCAA GGAGGACAAG
GCATGA
 
Protein sequence
MSPKSRDPGS TPDGASANVT VQNSPEFAAL RKALRRFVFP VTVAFLAWYA LYVLLSAYAR 
GFMAYKLVGH INVGLVFGVL QFVSTFLIAW AYSRYADKHL DPKAEAIKRH MDGEDAKEDK
A