Gene Snas_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3754 
Symbol 
ID8884953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand- 
Start bp4003024 
End bp4003560 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003512504 
Protein GI291301226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.852787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.231032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC GGGACAGGGT CGACGACATG CTCGCCACCT GGCGAGCCGA AATACCCGAG 
GCGGCCGGGC TGCCGTTCGA ACTGGGCAAA CGCGTCGCCC GGCTGGCCGA GCTGTTCGGC 
GCCGCCACCG AGTCGGTCCT CGCCGACCAC GGCTTCACCC GGATCGAGTA CGCGGTGCTG 
GCGAACCTGC GCGCCGCCGG AGCCCCCTAC CGCCTCAAAC CCGCGGCCCT GTCGCGCGCG 
CTCATCGTCA CGACCGGCGG GCTCAGCAAC ATCGTGACCC GGCTGCGCAC CGCCGGACTG 
GTGACCCGGG AGTCCGACCC CGCCGACGCC CGCAGCACCT GGGTGCGGCT CACCGACGCT 
GGCGTCCCGG TGGCCGACAC GCTCATCGAC GCCGTCACCA AGGCGCAGGG GCGGCTGACA 
CGTCCACTGC CCGACGAAAC CGCCCGCCAG CTCGCCGACC TGCTGCGCGA GGTCCTGATC 
GACATGGAGG GACCCGCCCC GCGTCCGGCG GACCTGCGCG GCGGCCCCGA ACGCTGA
 
Protein sequence
MTQRDRVDDM LATWRAEIPE AAGLPFELGK RVARLAELFG AATESVLADH GFTRIEYAVL 
ANLRAAGAPY RLKPAALSRA LIVTTGGLSN IVTRLRTAGL VTRESDPADA RSTWVRLTDA 
GVPVADTLID AVTKAQGRLT RPLPDETARQ LADLLREVLI DMEGPAPRPA DLRGGPER