| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3714 |
|---|
| Symbol | |
|---|
| ID | 8884913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 3957713 |
|---|
| End bp | 3958390 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003512464 |
|---|
| Protein GI | 291301186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.176655 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA CCCTGATCGT CGACGACGAC GCCCTGGTCC GTCTGGGACT GTGCGACCTG
CTCGACGACG AACCGGACAT CACCGTGGTG GCCCAGGCGG CCGACGGGAA AAGCGCTGTG
GCCCAAGCCG AACGGCACCG CGTCGACGTC GCGCTGATGG ACGTGCGCAT GCCCGGCATG
GACGGCATCG CCGCCACCGC CCGGCTGCGG GCGCTGCCCG AGCCCGCCCA GGTCATCGCG
TTGACGACCT TCGATCTCGA CGAGTACGTC TACGACATGA TCGCGGCCGG AGCCGCGGGC
TTCCTGCTCA AGGACACCGA TCCGGGCGAG ATCATCCGCG CGATCCGGGT GGTCGCCGCC
GGTGACGCCA TGCTGCACCC GGCCGCCGCC CGTCGCCTGA TCGAGCGCTA CCACCGCGCC
GCCCGGCCGC GGGCCACCGC CGTGCGCCAC CGCGTCGACC GGCTCACCCC GCGCGAGACC
GACGTCCTGC GGCACCTGGC CCTCGGCGCC ACCAACGCCG AGATCGCCGC GTCGTTGAGC
ATGCGGGAGA GCACCGTCAA AGCCCACGTC ACCCGGATAC TGGCCACACT GGACGTCACC
AACCGGGTGC AGGCCGCGCT GTGCGCCCGC GACGCCGAAC TGCCCCCGCC ACCGCGAGGT
GGGCGACGGG CGCGCTGA
|
|---|
| Protein sequence | MIRTLIVDDD ALVRLGLCDL LDDEPDITVV AQAADGKSAV AQAERHRVDV ALMDVRMPGM
DGIAATARLR ALPEPAQVIA LTTFDLDEYV YDMIAAGAAG FLLKDTDPGE IIRAIRVVAA
GDAMLHPAAA RRLIERYHRA ARPRATAVRH RVDRLTPRET DVLRHLALGA TNAEIAASLS
MRESTVKAHV TRILATLDVT NRVQAALCAR DAELPPPPRG GRRAR
|
|---|
| |