| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3688 |
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| Symbol | |
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| ID | 8884887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3922823 |
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| End bp | 3924022 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_003512438 |
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| Protein GI | 291301160 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00171007 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.751271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAC GCCTCACTCG CCGCCGATTC CTGTCCCTCA CGTCGGCAGG TCTGGTCGCC
ACTCCCCTGG CGGCGTGTAC CTCGTCGGAC CCGAACCCCG ACACCCTCAA GATCGGCTGG
GTCGGCCCGT TGACCGGCAA GGTCAAGATC GTCGGGGAGG AGATGCGCAC GGCCGCCGAG
TTGTACCTCA AACTGAAGAA CGACAAGCTC GGGGGCCGCA AGGCCGAACT GGTCGTCGTC
GACGAGGGCG ACACCCCCAA GGACGCGATG CCGAAGGTCC AGGAACTCAT CAAGGACGAC
GAGATCACCG CGCTGACCGG GATCCTCTAC AGTCCCACCT ACCTGGCCAC CGCCGAGCTG
GCGCAGGAAC GCGGGATCCC GCTGTTGGGT TCCGGCGGCC GTCCCGAGAT GGATCCCGAG
AAGCTGAACA ACCTGGACGG TCTGTGGCAC ACCAGCTGGA TCAACGGGCA GACCTCGGAA
GCGTTGGCGC CGTATGTCTA CAAGGAGATC GGCGGCCCCG TGTACGTGAT CGGGCCCGAC
GACGCGGGAG GCTACGGGTA CACCAAGACC TTCGCCAAGA CGTACAAGGA ACTGGGCGGC
AAACTTGCCA ATCCGGGCGG AAAACCGACC ATGACGCCCT ATCCGGAAAC CTCCGACTGG
ACCGTTTACC TCGACGAGAT CCACAACTCC AAGGCCGAGG CGGTATTCGT GTTCTACGGC
GGGGAATCCG CGGTGGGATT CGTCAAGCAG TACGCCGCCT CCGACGTCAA GAAGATTCCG
CTGTTCACCA GTTTCATCAC CGAAGGTTCG GTTCTACAGG CCCAGGGCAA AGCCGCGCTG
GGCATCAAGA GCTCGGTTCC CTACGCCACC GACCTTGACA ACAACGCCAA CCGGAAGCTG
ATCTCGGCCT GGTCCGACGC CCGCGAGGAC CTTCCGTCCA CCATGGCGGT TGGCGCCTGG
GACAGCATGC TGGTGCTCGA CATGGCCATC GGCCGGATTC CCGATGGCGA GGAAGTCACC
CGCGAGGCCG TCAAGAAACA GATCGACAGT CTCGGCGAGA TCGAAAGCCC GCGCGGGGTT
TGGCAGATGG GCGAAAAGAC CCACGCCCCG GTGCAGCGCT ATTACCTTCG CGAAGTCCGC
AAGGACGGGG AAGTCATCAG CAATGTCGCC TTGAAGACCC TGGCGACGTT GGGAGAGTGA
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| Protein sequence | MSIRLTRRRF LSLTSAGLVA TPLAACTSSD PNPDTLKIGW VGPLTGKVKI VGEEMRTAAE
LYLKLKNDKL GGRKAELVVV DEGDTPKDAM PKVQELIKDD EITALTGILY SPTYLATAEL
AQERGIPLLG SGGRPEMDPE KLNNLDGLWH TSWINGQTSE ALAPYVYKEI GGPVYVIGPD
DAGGYGYTKT FAKTYKELGG KLANPGGKPT MTPYPETSDW TVYLDEIHNS KAEAVFVFYG
GESAVGFVKQ YAASDVKKIP LFTSFITEGS VLQAQGKAAL GIKSSVPYAT DLDNNANRKL
ISAWSDARED LPSTMAVGAW DSMLVLDMAI GRIPDGEEVT REAVKKQIDS LGEIESPRGV
WQMGEKTHAP VQRYYLREVR KDGEVISNVA LKTLATLGE
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