Gene Snas_3676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3676 
Symbol 
ID8884875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand- 
Start bp3907939 
End bp3908583 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003512426 
Protein GI291301148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0625047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0780809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG TGCTGCTGGT CGACGACCAA CGCCTGATCC GGGCCGGGCT GCGGATGCTG 
TGCGAACCGG CCGCCGACAT CGAGGTGGTC GGCGAAGCCG ACGGCGGCCA GGCGGCGGTG 
AGGCTGGCCG GGGAACTGTG TCCCGACCTC GTCCTGATGG ACCTGCGCAT GCCCGGCATG 
GACGGCATCA CCGCCACCCA ACGGATCCTG GCCGAGCGAC CGTCGACCCG CGTCGTCGCG 
CTGACCACAT TCGACGATGA CGACCACCTG TACCCGGCAC TGGCGGCGGG AGCGTGCGGA 
TTCCTCGTCA AGGACACCTC ACCGAACGAA CTGCTGGAGG CGATCCGAAA AGCCGCCGAC 
GGAGACACCC CCTTCAGCGC CGGAGTCGTG AAACGCATCG TCGACAGTGC CGTTCGAGCC 
CGCGCGAGCG TTCCCACCGC CACACTCCCG AAACTGACCA CCCGGGAACG CGAAGTACTC 
GCGCTGGTCG GCGCCGGGTA CGCGAACGTC GACATCGCCG AGCGCCTGCA CCTCGGGGTG 
ACCACCGTCA AGACCCACAT CGCCAGCCTG ATGACGAAAA CGGGCTGCTC CAACCGGGTC 
CGGCTGGCGG TGCTGGCCGT CCGAAGTGGC ACCACGACCG AGTGA
 
Protein sequence
MIRVLLVDDQ RLIRAGLRML CEPAADIEVV GEADGGQAAV RLAGELCPDL VLMDLRMPGM 
DGITATQRIL AERPSTRVVA LTTFDDDDHL YPALAAGACG FLVKDTSPNE LLEAIRKAAD 
GDTPFSAGVV KRIVDSAVRA RASVPTATLP KLTTREREVL ALVGAGYANV DIAERLHLGV 
TTVKTHIASL MTKTGCSNRV RLAVLAVRSG TTTE