Gene Snas_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3501 
Symbol 
ID8884700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3708336 
End bp3708941 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003512257 
Protein GI291300979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000146812 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCAATC GCACCTGGAC CATCGCCATG GCGGCCAGCT CCGCACTGCT GATCGCTGGC 
GGGATCGCGG GGATAGCCGG TATCGCCAAC TCCGACCCCA ACCCCGATCC GGCGGCGTAT
GTCGACGGCT ACGGTGAGGT CACCGACGAC TTCAGTGACC ACGAGCGCGA AGCCGGAGTC
CTGTGCGAGG GCTGCGACAA CTCCAGTGAC ACCGACCTGG TGACGCTGTG GCAGGCGATC
ATGGTCGCCG AGGACAAACT CGCCCTCGAA GGCATGGACG GTGTATTCGG TACCAAGACC
GCCGAGGCGA CCGAGGAATG GCAAGAGGAC AACGGTCTCG AACCGACCGG ACAGGTGGAC
AAGCAGTCGT GGGCGCTGGC CGACGACAAC TTGTCGCGGA CCGAGGGCGA AGGCGCCGTC
TACTACGAGG GCGCCGAGGG AGCCGATGAG TCGGCTCGCA TGGAGTTCGA CCGGGTCGAC
GGCGAGGACA ACGCCTACAT GTTCATCGAG ATGTGGGACG TCGGCGGTGC CGCGATGGTG
CCCTCCGGCG GCGCCAGCTA CATCAAGCTG TTCGAGAAGA CCTTCACCAT GGAGGACCCC
TCCTAA
 
Protein sequence
MRNRTWTIAM AASSALLIAG GIAGIAGIAN SDPNPDPAAY VDGYGEVTDD FSDHEREAGV 
LCEGCDNSSD TDLVTLWQAI MVAEDKLALE GMDGVFGTKT AEATEEWQED NGLEPTGQVD
KQSWALADDN LSRTEGEGAV YYEGAEGADE SARMEFDRVD GEDNAYMFIE MWDVGGAAMV
PSGGASYIKL FEKTFTMEDP S