Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3474 |
Symbol | |
ID | 8884673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3673937 |
End bp | 3675235 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_003512231 |
Protein GI | 291300953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.455292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCATC GACATGACCG GTTGCTGCAC GTCGCGGCGC TGGCCCGCGT TGAAGGCGAA GGCGCGATGC GGGTCCGGGT CACCGGCGAC ACCGTCACCG AGGTCCAACT CGACATCTAC GAACCACCCC GGTTCTTCGA AGCCCTGCTG CGCGGACGCG GCCACACCGA ACCACCCGAC ATCACCTCCC GCATCTGCGG AATCTGCCCG GTGGCGTACC AGATGAGCGC GTGCGCGGCC ATTGAGGACG CGTGCGGCAT CACGGTGGAC AGTGGCATCC AAGACCTGAG AAGGCTGCTG TACTGCGGCG AATGGATATC GAGCCACGCG CTGCACATCT ACCTGCTGCA CGCTCCCGAC TTCCTGGGGT ACTCCGGGGC CGTCGACATG GCGCGTGACC AACGCCCCGT CGTCGAGCGG GGACTGCGGC TGAAGCAGGC GGGAAACATG ATCATGGAAC GCCTCGGGGG CCGGGCGATT CACCCGGTGA ATGTCCGGAT CGGCGGTTTC CACCGGCTGC CCACGCGCAC CGAGCTGGAT TCCCTCGTGG CTCCGTTGAC CCGGGCGCTC GACGACGCAC TCGACACGGT GACCATGGCC GCCGGTTTCG ACTTCCCCGA GTACGAGTGC CGACATGAAT GGCTGGCCCT GGTCGACCCG CGACAGCGCT ATCCCATCGA CGGCGGCGTG CCACACACCT CGCAAGGCTC GTTTCCGTTG CGCGAGTACA CCTCCCACGT CGTCGAGCAC CAGGTGTCCC ACTCCACCGC GTTGCACGCG CGGCTGGCGG ACGGTTCGCG ACCGCTGACC GGCCCCCTCG CCCGATACGC GCTCAACCAC GACCGGCTGT CGCCCCTGGC CCGGCAGACG GCGCGCTCGG CGGGTCTGGA TTCCGTGTGC CGCAACCCGT TTCGCAGCAT CATCGTGCGG GCGGTCGAAA CCGTGTACGC GGTGGAGGAG GCGCTGCGTA TCATCGCCTC CTACGAGCCC CCACCCCGCC CCGCCGTCCC GGTGCCGCCG GTGGCCGCCA TCGGATACGG TGCCACGGAG GCACCCCGCG GCGTGCTCTT CCATTCCTAT ACATTGGACG ACAGTGGAAC CGTGCTGGCG GCGAACATCG TGCCGCCAAC GGCCCAGAAC CAGACCGCGA TGGAACACGA CCTACGGGGT TTCGTCCAGG ACCACCTCAC CTTGGACGAC CACAGCCTCA CCCATGCCTG CGAACAGGCG ATCCGCAACT ACGACCCGTG CATCTCGTGC AGCACCCACT TCCTCGACCT GACGGTGGAA CGGGGCTGA
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Protein sequence | MTHRHDRLLH VAALARVEGE GAMRVRVTGD TVTEVQLDIY EPPRFFEALL RGRGHTEPPD ITSRICGICP VAYQMSACAA IEDACGITVD SGIQDLRRLL YCGEWISSHA LHIYLLHAPD FLGYSGAVDM ARDQRPVVER GLRLKQAGNM IMERLGGRAI HPVNVRIGGF HRLPTRTELD SLVAPLTRAL DDALDTVTMA AGFDFPEYEC RHEWLALVDP RQRYPIDGGV PHTSQGSFPL REYTSHVVEH QVSHSTALHA RLADGSRPLT GPLARYALNH DRLSPLARQT ARSAGLDSVC RNPFRSIIVR AVETVYAVEE ALRIIASYEP PPRPAVPVPP VAAIGYGATE APRGVLFHSY TLDDSGTVLA ANIVPPTAQN QTAMEHDLRG FVQDHLTLDD HSLTHACEQA IRNYDPCISC STHFLDLTVE RG
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