Gene Snas_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3473 
Symbol 
ID8884672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3673204 
End bp3673953 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID 
ProductNADH ubiquinone oxidoreductase 20 kDa subunit 
Protein accessionYP_003512230 
Protein GI291300952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACCA GCCTGGCGGT ATGGAAGTTC GCCTCCTGCG ACGGTTGCCA GCTGACGCTG 
CTCGACTGTG AGGACGAACT GCTGCCGCTC ACCGAGCGCA TCACCATCGC CCACTTCCTC
GAAGCGGACA GCTCCACCGT GGAGGGGCCC TACGATGTCT CCCTTGTAGA AGGATCGGTG
ACCACCGAAG CCGACGTGGC ACGGATAGGA CGGATCCGGG AGAACTCGAA GGTGCTGGTG
TCGATTGGCG CCTGCGCCAC CGCCGGTGGT GTTCAGGCCC TGCGCAACCT CGGCGACATC
AACGAGTTCG CGTCGATCGT CTACGCGCGT CCCGACTACA TCGACACCCT GGCGACGTCG
ACACCCATCG CCTCGCACGT GGAGGTGGAC TACGAGCTGC ACGGCTGTCC CATCGACAAG
GGACAGCTGC TGGAGTTCCT CGGCGCGCTG CTGACGGGCC GCAAACCCCG CCTGCCCGCC
CACAGTGTCT GTTTCGAGTG CAAGGCGAGC GGAACCACGT GCCTGATGGT CGCCGAGGGG
AGGCCGTGCC TGGGGCCGGT GACCCGGGCG GGGTGTGGCG CGATCTGCCC CCGATATTCC
CGCGGCTGCT TCGGCTGCTT CGGCCCCGCC CCGGGTGCCA ACACCCCGGC GTTGCGCCAC
CAACTGACCC AGCTGGGCAT GCCCGCCGTC CATCAGGACC GGGTGCTGCG AACCTTCACG
CCGGAGGCTT ACGATGACGC ATCGACATGA
 
Protein sequence
MKTSLAVWKF ASCDGCQLTL LDCEDELLPL TERITIAHFL EADSSTVEGP YDVSLVEGSV 
TTEADVARIG RIRENSKVLV SIGACATAGG VQALRNLGDI NEFASIVYAR PDYIDTLATS
TPIASHVEVD YELHGCPIDK GQLLEFLGAL LTGRKPRLPA HSVCFECKAS GTTCLMVAEG
RPCLGPVTRA GCGAICPRYS RGCFGCFGPA PGANTPALRH QLTQLGMPAV HQDRVLRTFT
PEAYDDAST