Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3452 |
Symbol | |
ID | 8884651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3654286 |
End bp | 3655155 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | UspA domain-containing protein |
Protein accession | YP_003512209 |
Protein GI | 291300931 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.936527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGA ACTCGCCCGC CCCAGTGGTC GTCGGTGTCG ACGGTTCGGA CGACAGCCCG AGCACCGTCA TCCTGGCCGC CGCATACGCC GCCGACCGTC AAAGTCCACT TCGTATCGTC CACGCCCGCG CGTGGCCCAC CTACACCGGC AATCCGCCGC TGCTCACCCC ACCCGTCGCG CCCATTGAGG ACGAACCGAC GGCCCGGCTG ATCGTCGACA ATGCCCGCGA CCTGGTCCGT GGAGTTCACC CCGACGTGAA CGTCACCGGC CACGTGATCG ACGGCGGACC CGCCGTCGTC CTGATAGACG AGTCCCGTCA CGCCACCCTC GTGGTCGTCG GATCCCACGG GCACGGCGGA CTGGCGAGAC GGGCGCTCGG CTCGACCGCG ATGGACGTGG CCGCGCGGGC GACCTGCCCG GTGCTGGTCG TGCGCGGTGA GGTCACCAGG AACGGTCCGG TCGTGGTGGG TGTGGACGGT CGGGGCACGT CCAAGGCCGC GATCGACTTC GCGTTCGCCG AGGCGCGGGC CCGGAGTGTG CCGCTGCGGG CCGTCCACGC CTGGCACCAC TCGACCAACC TCGTCGACAC CGCCGAGTCG GAAGCCGACG GACGGCAACG CGCGCGATCG GTCCTGGACG AATGGCTGTC CGATGATCGC GGGAACTTCG GTGATGTCGT CGTCGAGACC GTGCCGGTGC ATCAGGCCAA CCCCGCGCGG GCACTGGGGG AGGAGTCGGC GAAGGCGAGC CTGGTGGTCC TCGGGTCCCG GATGCGCGGC GCCCTGCGGT CCCGGCTATT GGGTTCGACC GGATACGCGA TGGTCCACAC CAGCCAGTGC CCGGTGGTGA TCGTTCGCTC CGCGACATAG
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Protein sequence | MNENSPAPVV VGVDGSDDSP STVILAAAYA ADRQSPLRIV HARAWPTYTG NPPLLTPPVA PIEDEPTARL IVDNARDLVR GVHPDVNVTG HVIDGGPAVV LIDESRHATL VVVGSHGHGG LARRALGSTA MDVAARATCP VLVVRGEVTR NGPVVVGVDG RGTSKAAIDF AFAEARARSV PLRAVHAWHH STNLVDTAES EADGRQRARS VLDEWLSDDR GNFGDVVVET VPVHQANPAR ALGEESAKAS LVVLGSRMRG ALRSRLLGST GYAMVHTSQC PVVIVRSAT
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