Gene Snas_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3452 
Symbol 
ID8884651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3654286 
End bp3655155 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content70% 
IMG OID 
ProductUspA domain-containing protein 
Protein accessionYP_003512209 
Protein GI291300931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.936527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA ACTCGCCCGC CCCAGTGGTC GTCGGTGTCG ACGGTTCGGA CGACAGCCCG 
AGCACCGTCA TCCTGGCCGC CGCATACGCC GCCGACCGTC AAAGTCCACT TCGTATCGTC
CACGCCCGCG CGTGGCCCAC CTACACCGGC AATCCGCCGC TGCTCACCCC ACCCGTCGCG
CCCATTGAGG ACGAACCGAC GGCCCGGCTG ATCGTCGACA ATGCCCGCGA CCTGGTCCGT
GGAGTTCACC CCGACGTGAA CGTCACCGGC CACGTGATCG ACGGCGGACC CGCCGTCGTC
CTGATAGACG AGTCCCGTCA CGCCACCCTC GTGGTCGTCG GATCCCACGG GCACGGCGGA
CTGGCGAGAC GGGCGCTCGG CTCGACCGCG ATGGACGTGG CCGCGCGGGC GACCTGCCCG
GTGCTGGTCG TGCGCGGTGA GGTCACCAGG AACGGTCCGG TCGTGGTGGG TGTGGACGGT
CGGGGCACGT CCAAGGCCGC GATCGACTTC GCGTTCGCCG AGGCGCGGGC CCGGAGTGTG
CCGCTGCGGG CCGTCCACGC CTGGCACCAC TCGACCAACC TCGTCGACAC CGCCGAGTCG
GAAGCCGACG GACGGCAACG CGCGCGATCG GTCCTGGACG AATGGCTGTC CGATGATCGC
GGGAACTTCG GTGATGTCGT CGTCGAGACC GTGCCGGTGC ATCAGGCCAA CCCCGCGCGG
GCACTGGGGG AGGAGTCGGC GAAGGCGAGC CTGGTGGTCC TCGGGTCCCG GATGCGCGGC
GCCCTGCGGT CCCGGCTATT GGGTTCGACC GGATACGCGA TGGTCCACAC CAGCCAGTGC
CCGGTGGTGA TCGTTCGCTC CGCGACATAG
 
Protein sequence
MNENSPAPVV VGVDGSDDSP STVILAAAYA ADRQSPLRIV HARAWPTYTG NPPLLTPPVA 
PIEDEPTARL IVDNARDLVR GVHPDVNVTG HVIDGGPAVV LIDESRHATL VVVGSHGHGG
LARRALGSTA MDVAARATCP VLVVRGEVTR NGPVVVGVDG RGTSKAAIDF AFAEARARSV
PLRAVHAWHH STNLVDTAES EADGRQRARS VLDEWLSDDR GNFGDVVVET VPVHQANPAR
ALGEESAKAS LVVLGSRMRG ALRSRLLGST GYAMVHTSQC PVVIVRSAT