Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3451 |
Symbol | |
ID | 8884650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3653218 |
End bp | 3654099 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | UspA domain-containing protein |
Protein accession | YP_003512208 |
Protein GI | 291300930 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.936527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCTC CGATCATCGT CGGATTCGAC GGTTCACCAC ACAGCCAGGT CGCGGTCGAC TGGGCGGCCG AGGAAGCCCG ACTGCGGCAG CGTCGGTTGC TGATCATCCA CTCGTTCCTG GTGTTGTCCC CGTTGGCGAC GGACCTCGAC TCCAGCAGGC ACGAAGCCTC GCGTGCCAGC GTGGGCGATC TCGTCGACAA GGAAGTCGCC AGAATCCGCG ACCTGAACCC CGACCTGGAG GTCAGCGGCA AGGTCGTCGG TGGCATGTCG GCCAGCATCG ACCTGGTCGA GGCGTCCGAG GACGGCGAAC TGTTGGTCGT TGGCAGCCGT GGCCGAGGCA GATTCACCTC GCTGCTGCTG GGCTCGACCT CGACGCAGGT CACCGCCTAC TCGCGCTGCC CGGTCGTGGT GGTCCGCGGC CCGGCGCCGG TGAGGAGCCA GGAACCCGAT CGCATCGTCG TCGGCGTGGA CGCCTCCCCG CTGTCCCAGG CCGCACTGCG GTTCGCCTTC GAGGAGGCAT CGCTGCGCGA AGCCCGGCTG ATCGCCGTTC ACGCCTGGAC CCACCCGGTC GCCACCGAAT CCGGCGACGT GCTTCCGCAG GTCTACTCCA TCGAGGAACG CGCCGACAGC GAGAAACGCG TGCTGGCCGA GGCTTTGGCC GGGTGGCCGC AGAAGTACCC CGACGTGCCG GTGGAGCGGG TGTGTGAACG CGTCGACGCC CGCCAACTGC TGCAGGAGAA ATCCGCGGGG GCCTGCCTCG TGGTGTTGGG TTCGCGAGGG CACGGCGGTT TCACCGGCCT GCTGCTGGGC TCCACCACGC AGGCGATGGT GCATCACGCC GACGCGCCCG TGGCCGTCGT CCACTCGTCG GGCGCATCCT GA
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Protein sequence | MAAPIIVGFD GSPHSQVAVD WAAEEARLRQ RRLLIIHSFL VLSPLATDLD SSRHEASRAS VGDLVDKEVA RIRDLNPDLE VSGKVVGGMS ASIDLVEASE DGELLVVGSR GRGRFTSLLL GSTSTQVTAY SRCPVVVVRG PAPVRSQEPD RIVVGVDASP LSQAALRFAF EEASLREARL IAVHAWTHPV ATESGDVLPQ VYSIEERADS EKRVLAEALA GWPQKYPDVP VERVCERVDA RQLLQEKSAG ACLVVLGSRG HGGFTGLLLG STTQAMVHHA DAPVAVVHSS GAS
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