| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3419 |
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| Symbol | |
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| ID | 8884618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3621322 |
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| End bp | 3624051 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003512176 |
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| Protein GI | 291300898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00522021 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGGTC GGAAAACAGA GCTCAATCGG TTGCGGCGGC TGGCCGCCGA GTCGCGGGAC
GGCCGTGGCA ACGCGATCGT GGTGCGTGGT GGTCCCGGGA TCGGTAAGTC GGCGTTGCTG
GACGAGTTGG CGGGGGCGGT GACCGATGTT CGGGTGTTGC GGGTGACCGG GTTGGAGACC
GAGGCGGAGT TGCCGTTCGC GGCGCTGCAC CTGTTGTTGC GGCCGGTGTC CGGGTTGGTG
GGGGAGCTGC CGGATCCGCA GCGGGATGCC TTGCGCGCGG CGTTCGGGCA GGGCGGTGGG
GTGGACGCGG ACCGGTTCCT GGTGGGCCTG GCGGTCTTGA CGTTGTTGGC GGACCTGGCC
GAGGAGCGGC CGGTGTTGTG CCTTGTGGAT GACGCGCAGT GGCTGGATCG GGCCAGTGCG
GACGCTTTGG TGTTCGCGGC ACGGCGGTTG GACGCCGATC GGATCACCAT GGTGCTGGCG
GTGCGCGACG ATGCGGAGAA CGCGGCGTTG GCCGGGCTGA CGGAGTTGCG GCTGGACGGG
TTGGACGAGG CGCAAAGCCA CGCTCTGTTG TCGCAAGTGG CCGATGACCT GGTGGCTGAG
GTTCGGGAAC GGCTGGTGGT CGAGGCGCAG GGCAATCCGT TGGCGCTCAT CGAGTTCACT
CGGGCGTTGA GCCCGGAGCA GCGGGCGGGA CGGTTGGATC CGTTGCCGTT GGCCGCTACC
GCGACGGTGG GGCGGTTGGA GGAGTCGTTG CGGGCCGCGG TTCGGTCGTT GCCCCAAGCG
GCGCGGCAGT TGTTGGTGTT CGCGGCGACC GAGGGGACCG GGAACCTCGG GGTGGTGTTG
CGGGCGGCTG CTGGTGCCGA TGTCTCGGAT CTGGTGCCCG CCGAGCGGGC GCGGTTGGTG
CATGTCAGTG AGCATCGGCT GGAGTTTCGG CATCCGTTGG TGAAGGCGGC GGCGTATCGG
GAAGCGCCGT TGGCGGAACG CATCGAGGCG CATCGGGCGT TGGCGGCGGT TCTGGACGAT
GAGGCTGACG CCGATCGTCG GGCTTGGCAT TTGTCGGCGG CGGCTTTGGG GCCCGATGAG
GAGCTCGGGG AGGTTTTGCG GCTGGCGGGG CAGCGGGCGC GGCGGCGGGG GAGTCACGCT
TCGGCGGTTA CCGCTTATGA GCGGGCGGCG CAGTTGACCG TGGAGCGGGA GCGGCGTGCC
GGGCGGCTCA CCGCTGCCGC CGAGTCCGCT GTGGTGGCGG GGCAGTTGCG GAGGGCTCGC
GCGGTGATGG AGCGTGCGCG GCGGTTGACC ACCGATCCGG CGGCGGTCGC GCGGCTCGCG
GTGATTCAGG CGACAGTGGA CTCCGAGCTT GGTGGGGTGA GCGCGCCCGC CCGGACGTTG
CTCGACGCGG TTCCGGCGAT CACCGCCGAC GCGCCGAACC AGGCGGCGAA CATGCTCGCC
CAGGCCGCCA ACAGCGCGTG GTTCGCGGGT GATCACGCGT CGCTGCGGGC CAGTGCCGAG
TTGTTGACCA CACTGGAGCC GAGGCTGGAC GCCGCGTTGG TTCCGATCGT GCGCACCGTG
TCCGGAATGG AACGGCTCGT GGCGGGCGAT GTGAAGACCG GTCTCGATCT GTTGCGGGCG
GCGCTCGCGC CGAGTGTGGC GTCGGCGCGG TCGGTCGCGC ATGAGGAGGA GTCGGTCGCC
GCGACGTTCG CGGTCTTCGC CGCGCTCATG TCCGGGAACA CCGACGCCGC ATGCGAACTG
GCGTCGGCTT GGGTGACTGA TTGTCGTCGG CGCGGCCGTA TCGGGTCGTT GCCGCACGCG
TTGCAGCTGT TGACCCAGGC GCAGTTGCTG AGTGGACGGC ACTTGCAGGC CGCGGCGGCC
GGGGCCGAGG CGTGGCGGAT CGCCGAGGAC ACCGGGCAGT CGGGGCGGTT GCGGTACCTG
GGCGGGATTC TGGCGTGGTT GTCGGCGATC CGTGGCGACG ACGCCGAATG CGTGACGCTG
GCCGAGCGTG CCGAGGGCGC GGTGCGGGAA CGCAATGGTT CCGGTTGGGG CGAGTGCGCG
CTGGGGCTGC TCGACCTGGT GCGCGGTCGA CCCGCGGCGC TTGTCGAACG TATGGGGCGC
ATCATGGACG GGCCGCTGCG GCACACCGTC ATCGTCACGA TCGCCATTCC CGATTTCGTG
GAGGCGGCGG TGCGGCTCGG CGAACCGCGA CTGGCCGACG GGGCGTTCGC GCGATTCGAG
GCGTGGGCGG TGGCGAGCGC GCAGCCGTGG GCTCTGGCGA TGGTCGAACG GTGCCGGGCC
CTGCTGGAGC CCGACGTCGA AGCCGAGGAC CGGTTCCGGG CGGCACTGGC GCATCACGTC
CATGGTGGAC GCTGTTTCGA GCACGCTCGT ACCCGGCTGC TGTACGGGGA GTGGCTGCGC
CGACGTCGCC GCCGGGCCGA CGCTCGCGAG CAGCTGAGCG CCGCCGCGCA TCAGCTCGCG
GACCTGGGCG CCATCCCGTG GGCCGAGCGG GCCCGCTCGG AGCTGGCCGC GACCGGCGGC
ACGCTGGCCC CGCATCAGGA CAGTCCTTTG GGTACGTTGA CGCGGCGGGA GCTGGACGTG
GTCCGGTTGG CCGCGACCGG TGCCACCAAT CGACAGATCG CCGCGCAGCT GTTCCTCAGC
CCCCGCACCG TCGGGTATCA CCTGTACAAG GCCTACCCCA AGCTCGGTGT GACGACCCGC
GCGGAACTGG CCGAGCGGGA CTTCGGCTGA
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| Protein sequence | MIGRKTELNR LRRLAAESRD GRGNAIVVRG GPGIGKSALL DELAGAVTDV RVLRVTGLET
EAELPFAALH LLLRPVSGLV GELPDPQRDA LRAAFGQGGG VDADRFLVGL AVLTLLADLA
EERPVLCLVD DAQWLDRASA DALVFAARRL DADRITMVLA VRDDAENAAL AGLTELRLDG
LDEAQSHALL SQVADDLVAE VRERLVVEAQ GNPLALIEFT RALSPEQRAG RLDPLPLAAT
ATVGRLEESL RAAVRSLPQA ARQLLVFAAT EGTGNLGVVL RAAAGADVSD LVPAERARLV
HVSEHRLEFR HPLVKAAAYR EAPLAERIEA HRALAAVLDD EADADRRAWH LSAAALGPDE
ELGEVLRLAG QRARRRGSHA SAVTAYERAA QLTVERERRA GRLTAAAESA VVAGQLRRAR
AVMERARRLT TDPAAVARLA VIQATVDSEL GGVSAPARTL LDAVPAITAD APNQAANMLA
QAANSAWFAG DHASLRASAE LLTTLEPRLD AALVPIVRTV SGMERLVAGD VKTGLDLLRA
ALAPSVASAR SVAHEEESVA ATFAVFAALM SGNTDAACEL ASAWVTDCRR RGRIGSLPHA
LQLLTQAQLL SGRHLQAAAA GAEAWRIAED TGQSGRLRYL GGILAWLSAI RGDDAECVTL
AERAEGAVRE RNGSGWGECA LGLLDLVRGR PAALVERMGR IMDGPLRHTV IVTIAIPDFV
EAAVRLGEPR LADGAFARFE AWAVASAQPW ALAMVERCRA LLEPDVEAED RFRAALAHHV
HGGRCFEHAR TRLLYGEWLR RRRRRADARE QLSAAAHQLA DLGAIPWAER ARSELAATGG
TLAPHQDSPL GTLTRRELDV VRLAATGATN RQIAAQLFLS PRTVGYHLYK AYPKLGVTTR
AELAERDFG
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