Gene Snas_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3400 
Symbol 
ID8884599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3604116 
End bp3604601 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512157 
Protein GI291300879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000709741 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.10054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAC TGGTGACGAT CGGCGTCTAC GACTTCGACG CCGAGTCCTT CCTACAGCGG 
CTGCGCCACG CCGACGTGCG GGTGTTGTTC GACGTCCGGC AGCGGCGTGG TGTCCGCGGA
TCCGAGTACG CCTGGGCGAA CTCGCAACGG TTGCAGGCGG CCCTGGCCGA GGCCGGAATC
GCCTACGAAC ACCATCCCGA GCTCGCCCCC ACCACGGAGC TGCGCCGACT TCAGTACGCC
GAGGACGATC GCAACAGCGT CGGGAAACGC TCGCGCCGCG AACTGGCCGA TGAGTACATT
CGCCGCTACA CGGCCGAGAT CCTCGACGGC GCCGACCTGG CACCGATCGT GTCGGCGCTG
CCGAGCCACG GAACCGGGGC ACTGTTCTGT GTGGAGCGCG ACCCGGAGGC GTGCCACCGT
TCACTGATCG CGCGGCTGCT GGCCGAGACG CAAGACGTCA CGATCGAGCA CCTGCGCCCG
TCATGA
 
Protein sequence
MGKLVTIGVY DFDAESFLQR LRHADVRVLF DVRQRRGVRG SEYAWANSQR LQAALAEAGI 
AYEHHPELAP TTELRRLQYA EDDRNSVGKR SRRELADEYI RRYTAEILDG ADLAPIVSAL
PSHGTGALFC VERDPEACHR SLIARLLAET QDVTIEHLRP S