| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3399 |
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| Symbol | |
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| ID | 8884598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3602178 |
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| End bp | 3604121 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512156 |
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| Protein GI | 291300878 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00991696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.321929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATCC TCATCAAGGT GCTGGGGCCG GTGCGGGTCA CCGACGCGGC GGGCGGTCCG
GTCGCGGTGG GCAGTCAGCG GCGGCGTGAG CTGCTGGGTC GGCTGGTGGC CGCCGGGGGC
CGCGCGGTGT CGCTGCGGGC GCTCGTCGAG GACCTGTGGG ACGACCCGCC GTCCACGGCC
ACCGGCACGG TGCGCACCTT CGTGTCGGAG CTGCGGCGCG CGTTGGAGCC GCAGCGTTCG
CCGCGGGGCC GCTCACGGCT CATCGAGACC GTCGGCACCG GGTACGCGCT GCGGGTGCCG
CGCGAGCGCG TGGACGCGCA CCGGTTCGAG GACACGCTGC GCGCCGCCCG GGATCAGTCC
GGTCAGGACG CGGCTGCCGC GCTGACCGAC GCGATCGCTT GGTGGGACGG CGAACCGTAC
GCCGATCTCG ACGCCTCGGC GTGGGTGGTC CGCGAGCGCG CCCGGCTGGG CGAGCTTCAC
CTCCAGGCGG TCGAGTTGCG CGCGCGGGCG GTGATCGACC TGGGGCGCGG CGAGTCGCTG
GTGGCGGAGC TGGAGGCGTT CGCGGCCTCG CATCCGTGGC GCGAGCACGC CTGGGTGTTG
CTGTCCCACG CCCTGTACCA GGCCGACCGG CAGGTCGACG CACTGTCCAC ACTGCGCACG
GCTCGGGAGC GGCTGCTGGA CAGGTTCGGG TTGGAGTCGG CGGCCGGTCT CGACGATCTC
GAACGTGACA TCCTGCGTCA CGCCGCGCAC CTGGCGCCCG CCGCCCGCGA CGGCAACCGG
CTGGGGCTGC TCACCCGCAC CGAGGCGAGC GGGACCTACT CCCGGCTGCG CGCCATGAGC
ACTGTGGCCA GTGCGGCGGC GATCACCGGC GGCACCAACC TGGTGCTGGC CCAGCGGCAA
CGCGCGGCGG CCGTCGCCGA GGCCGAGCGC ACCGACGACC CCGATCTCAC CGCTCGTGTC
ATCGCCGCCT ACGACGTCCC GGCCGTGTGG TCGCGCGCCG ACGATCCCGA ACAGTCGCGG
GCGCTGGTTG CGACGACCCG GCGCACTCTG CTGCGGCTCG GGTCGGACGC CCCCGCGGCG
CTTCGGGCGC GGCTGCTGGC CACCGTCGCG CTGGAACACC GGGGGTCGCG CGACGCGTGG
GCCGCCGAGG CCGCGCGCGA AGCCGAGCGC ATCGCCCGCG ACCTGTCCGA CCCGAACGTG
CTGGTGCTGG CGCTCAACGG CCGGTTCATG CAGTCCTTCC AGCGTCCGGG AAACACCGCC
GAACGCGACG CCATCGCCAG TGAACTCATC GCGGTGTCCA CTCGGCACGA TCTGGCGACG
TTCGAGATCC TCGGTCACCT CATCAAGATC CAGGTCGGCG CGGCGCTGGG CGACATCGAT
ACCGCCGAGC GCCATGTCGC GGCGGCCGAG CGGCTGGCCG ACGTCCACGA GACGCCGCTG
GTTCGCGTCC TGACCGCCGC CTTCGCCGCG ATGCGACTGG CGCAGGCGTC CGGCGATCCC
GCCGAGGCCG CGCGGGCGTA CCGGGCTGTG GCTACGGAAC TGGCGGGTGC CGGTATGCCC
GGGGTGGAGG CCGGGATGTT CCCGCTCGCG CTGTTGTCGT TGCGGTTGCG GCACGGGCGG
CCCGCGCCGG TGGATCCGGA TCTCGACAGG GGTCCCTATC GTGCCTGGGT GCAGCCGCTC
ATCGATCTCG CGCGGGACGA CCCGTCGGCG GCGCGCCGGT CGGCTGCCGC GTTGCCCGAA
CCGGCCGCCG ACCACCTGTA CGACGCGCTG TGGGCGGTCA CCGCACATAC CGCGATCCGC
TTGGAGGACG CGTCGCTGGC GGCTCGGGCC CGCGAGGCGC TGGACCCGTT GCGGGGCCAG
ATCGCGGGCG GGACAACGGC TATCGTCAGT TTCGGACCGG TGGATGACAT CCTGGCCGAG
CTCGACGCGC ATCGCGGGTC ATGA
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| Protein sequence | MDILIKVLGP VRVTDAAGGP VAVGSQRRRE LLGRLVAAGG RAVSLRALVE DLWDDPPSTA
TGTVRTFVSE LRRALEPQRS PRGRSRLIET VGTGYALRVP RERVDAHRFE DTLRAARDQS
GQDAAAALTD AIAWWDGEPY ADLDASAWVV RERARLGELH LQAVELRARA VIDLGRGESL
VAELEAFAAS HPWREHAWVL LSHALYQADR QVDALSTLRT ARERLLDRFG LESAAGLDDL
ERDILRHAAH LAPAARDGNR LGLLTRTEAS GTYSRLRAMS TVASAAAITG GTNLVLAQRQ
RAAAVAEAER TDDPDLTARV IAAYDVPAVW SRADDPEQSR ALVATTRRTL LRLGSDAPAA
LRARLLATVA LEHRGSRDAW AAEAAREAER IARDLSDPNV LVLALNGRFM QSFQRPGNTA
ERDAIASELI AVSTRHDLAT FEILGHLIKI QVGAALGDID TAERHVAAAE RLADVHETPL
VRVLTAAFAA MRLAQASGDP AEAARAYRAV ATELAGAGMP GVEAGMFPLA LLSLRLRHGR
PAPVDPDLDR GPYRAWVQPL IDLARDDPSA ARRSAAALPE PAADHLYDAL WAVTAHTAIR
LEDASLAARA REALDPLRGQ IAGGTTAIVS FGPVDDILAE LDAHRGS
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