| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3283 |
|---|
| Symbol | |
|---|
| ID | 8884482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3473244 |
|---|
| End bp | 3474308 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003512045 |
|---|
| Protein GI | 291300767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.371514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACAC CGTCCCCCAA ATCCACCCCC GCGCCCGGCA AGCGGCACCG CTACAGCATG
TCCGACGTGG CGGCCCGCGC CGGAATCTCC GTCGGCACCG TGTCCAACGT GCTCAACCAC
CCCGAGCGCG TCGCCGAGGA GACCCGCCGC CGCGTGCGGG AAGTGATCGA CACCCTGGGC
TTCATCCGCA ACGCCCCCGC GATGAACCTC CGCTCCGGCT CCAGCGCGGC GGTGGGCGTC
GTCGTCCTCG ACATCGCCAA CCCGTTCTTC ACCGAAGTCC TGCGCGGCGC CGAGGACCGC
CTGGCCGACG AGGGCCTGCT GCTCATCGTG TGCAGCTCCG ACGACGCCCT CGACAAGGAG
GAGCACTACC TGCGCGTCCT GGAGGAACAC CGGGTCCAGG GCATGCTCAT CACCCCGGCG
ATGGCCGACC TCAACCCCCT CGTCGACCTG CGCAACCGGG GCCTGGGCGT GGTCCTGCTC
GACCGCACCG AAGCCGACGG CAAACTGTGC GCCGTCGCGG TCGACGACGT CCGGGGCGGC
GAACTCGCCG GTGAACACCT GCTGTCCCTC GGCCACCGCC GCATCGCCTT CCTCAATGGA
CCGTTGTCGC TGCGCCAGTG CGCCGAACGC CGCGAAGGTC TGCGCCGAGC CGTCACCACG
GCCGGACTCG ACCCCGACGG CGTCCTCACC GAGATCGAGC TCCCCTCCCT CAACGCCCAG
GGCGGGGAGG CCGCGATCCG CGAACTCGGC CGCGACCTCC CCACGGCGGT CTTCTGCGTC
AATGACCTGG TCGCCCTCGG CGCGCTGCGC GCCCTCGACC AACGCGGAAT CGTGGTCCCC
GACCAGATCT CACTGGTCGG CTACGACGAC GTCGAGTTCA CCGCCATGCT CTCGCCGTCA
CTGACCACGA TCCGCCAGCC CAAGTACCAA CTGGGCAAGG CCGCCGCCGA ACTCTTCCTC
ATCGACGCCC GCCAGGACGA CGACCACTGG CACCAGCAGA CGGTGTTCCA GCCCGAACTC
ATCGTCCGCG ATTCGACGAC GGCCTCCCAG CGGGCGTCCT CGTAG
|
|---|
| Protein sequence | MNTPSPKSTP APGKRHRYSM SDVAARAGIS VGTVSNVLNH PERVAEETRR RVREVIDTLG
FIRNAPAMNL RSGSSAAVGV VVLDIANPFF TEVLRGAEDR LADEGLLLIV CSSDDALDKE
EHYLRVLEEH RVQGMLITPA MADLNPLVDL RNRGLGVVLL DRTEADGKLC AVAVDDVRGG
ELAGEHLLSL GHRRIAFLNG PLSLRQCAER REGLRRAVTT AGLDPDGVLT EIELPSLNAQ
GGEAAIRELG RDLPTAVFCV NDLVALGALR ALDQRGIVVP DQISLVGYDD VEFTAMLSPS
LTTIRQPKYQ LGKAAAELFL IDARQDDDHW HQQTVFQPEL IVRDSTTASQ RASS
|
|---|
| |