Gene Snas_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3237 
Symbol 
ID8884436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3414983 
End bp3417379 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content67% 
IMG OID 
ProductPhosphoketolase 
Protein accessionYP_003512000 
Protein GI291300722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0305245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0217668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAC TGGAGCAACT GGAACAACCC GCGCTGACCG ACGACGAACT GGCCGCCGTC 
GACGCGTACT GGCGGGCGGC CAATTACCTG TCGGTCGGGC AGATCTATCT GCTGGACAAC
CCGTTGCTGA CCGAGCCGCT GCGGCCGGAG CACATCAAGC CGCGGTTGCT GGGGCATTGG
GGGACCACAC CGGGGCTGAA CTTCTGTTAC GCGCACCTGA ACCGGGCGAT CAAGGCCCTC
GACCTCGACA TGATGTTCGT GACCGGGCCG GGCCACGGTG GCCCGGCGCT GCTGGCCAAC
AGCTGGCTGG AGGGCAGCTA CAGCCAGGCG TATCCGGCGG TGGCCCGGGA CGGCAAGGGG
ATGCGGACGT TGTTTCGGCA GTTCTCGTTT CCCGGCGGCG TCCCCAGCCA TGTGGCCCCC
GAGGTCCCGG GGTCCATTCA CGAAGGCGGG GAGCTGGGTT ACTCGCTGGC GCACGCCTAC
GGTGCCGCGT TCGACAATCC CGATCTGATC GTGGCGTGTG TGGTGGGTGA CGGCGAGGCC
GAGACCGGCC CGCTGGCGAC GAGCTGGCAC GCCAACAAGT TCTGCGACCC GGTCGGTGAC
GGGGCGGTGT TGCCGATTCT GCACCTCAAT GGCTACAAGA TCGCCAACCC GACGGTGCTG
GCCCGGATCC CCCGCGACGA ACTGGACGCG CTGCTGCGCG GATACGGCCA CAAACCATAC
TATGTGGAGG GTCACGATCC GGAGGCGATG CATCAGGCCA TGGCCGAGGT CGTCGACGCC
GCGATCGCCG ATATCCGGGC CATCCAACGC CAGGCCCGCG ACGGCGGGCC GAGCCGACGG
CCGCGGTGGC CGATGGTGGT GTTGCGAACC CCCAAGGGCT GGACCGGTCC CGGCAGCGTC
GACGGGGTGC CGGTGGAGGG GACCTGGCGG TCGCATCAGG TGCCGCTGTC CGGGGTGCGC
GACAACCCGG ATCACCTGCG GCAGCTGGAG GAGTGGCTGC GGTCGTACCG GCCGGGCGAG
TTGTTCGACG GCGACGGTGC CCCGGTCGCG CGGCTGGGGG AGCTGGTCCC CGACGGGCAG
CGACGCATGG GCGCCAATCC GCACGCCAAC GGCGGGCTGC TGCTGCGCGA CCTGGAGCTT
CCCGACTTCC GCGACTACGC GGTCGCGGTG GACCAGCCCG GCGTCACCTC GTCCGAACCC
ACCCGGGTGT TGGGCCGTTT CCTGCGGGAT GTGCTGCGCG ACAACGCCGA TACGGCGAAC
TTCCGGCTGT TCGGGCCCGA CGAGACCGCT TCGAACCGGC TGGACGCGGT GTACGAGGTG
ACGGGCAAGG CCTGGCAGTC TCCGATCGTG GACACCGACG AGAACCTGTC CGCGCACGGG
CGGGTGGTGG AGGTGTTGTC GGAGCACGTG TGTCAGGGCT GGCTGGAGGG CTATCTGCTG
ACGGGGCGGC ACGGTCTGCT GTCGTGTTAT GAGGCTTTCG TCCACATCGT GGATTCGATG
TTCAACCAGC ACGCGAAGTG GCTGAAGGTG TCGCGGGGCC TGCCGTGGCG GCGGCCGGTG
GCGTCGTTGA ACTATCTGCT GACCTCGCAC GTGTGGCGTC AGGACCACAA TGGTTTCTCG
CATCAGGATC CGGGTTTCAT CGACCATGTG GTCAACAAGA AAGCCGACAT CATCCGGGTG
TATCTGCCGC CGGACACCAA CACGCTGCTG TCGGTCGGGG ATCACGTGTT GCGCAGCAAG
AACTATGTCA ACGTGATCGT GGCGGGTAAG AACGACAGCC CCAACTGGCT CAGCGTCGAC
GAGGCGGTGC TGCACTGTGC CCGGGGTGCT GGGATCTGGG ACTGGGCCGG TACCGAGGCC
GAGGGTGAGG AACCCGACGT CGTGTTGGGT TGCGCCGGTG ACGCGCCCAC ACTGGAGGTG
CTGGCCGCGG CGTCCCTGCT GCGGCGACAT CTTCCGTCTC TGCGGGTGCG GGTCGTCAAC
GTCGTGGACT TGATGCGGTT GCAGTCGGCG ACGGAGCACC CGCACGGCAT GACCGATCGG
GAGTACGACA CGTTGTTCAC CGCTGATCGG CCGGTGATCT TCGCGTATCA CGGGTACCCG
TGGCTGATCC ACCGTTTGAC GTACCGCCGC AACGGCCACG ACAACCTCCA CGTGCGCGGG
TACAAGGAGG AGGGGACGAC CACGACGCCG TTCGACATGC TGGTGCTCAA CGACATGGAC
CGGTTCCAGC TGGTCACCGA CGTCATCGAC CGGGTGCCGG GGTTGGGTCG TCGTGCCGCC
GGGGTGCGGC AGTCGATGCA GGACAACCGG ACCCGGCACC GCTACTGGGT GCGGCAGCAC
GGTGAGGATC TGCCGGAGGT GCGTGACTGG GAATGGTCTG ATGGGCGGAC GGGGTGA
 
Protein sequence
MSKLEQLEQP ALTDDELAAV DAYWRAANYL SVGQIYLLDN PLLTEPLRPE HIKPRLLGHW 
GTTPGLNFCY AHLNRAIKAL DLDMMFVTGP GHGGPALLAN SWLEGSYSQA YPAVARDGKG
MRTLFRQFSF PGGVPSHVAP EVPGSIHEGG ELGYSLAHAY GAAFDNPDLI VACVVGDGEA
ETGPLATSWH ANKFCDPVGD GAVLPILHLN GYKIANPTVL ARIPRDELDA LLRGYGHKPY
YVEGHDPEAM HQAMAEVVDA AIADIRAIQR QARDGGPSRR PRWPMVVLRT PKGWTGPGSV
DGVPVEGTWR SHQVPLSGVR DNPDHLRQLE EWLRSYRPGE LFDGDGAPVA RLGELVPDGQ
RRMGANPHAN GGLLLRDLEL PDFRDYAVAV DQPGVTSSEP TRVLGRFLRD VLRDNADTAN
FRLFGPDETA SNRLDAVYEV TGKAWQSPIV DTDENLSAHG RVVEVLSEHV CQGWLEGYLL
TGRHGLLSCY EAFVHIVDSM FNQHAKWLKV SRGLPWRRPV ASLNYLLTSH VWRQDHNGFS
HQDPGFIDHV VNKKADIIRV YLPPDTNTLL SVGDHVLRSK NYVNVIVAGK NDSPNWLSVD
EAVLHCARGA GIWDWAGTEA EGEEPDVVLG CAGDAPTLEV LAAASLLRRH LPSLRVRVVN
VVDLMRLQSA TEHPHGMTDR EYDTLFTADR PVIFAYHGYP WLIHRLTYRR NGHDNLHVRG
YKEEGTTTTP FDMLVLNDMD RFQLVTDVID RVPGLGRRAA GVRQSMQDNR TRHRYWVRQH
GEDLPEVRDW EWSDGRTG