Gene Snas_3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3225 
Symbol 
ID8884424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3405173 
End bp3405970 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content68% 
IMG OID 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003511988 
Protein GI291300710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.103281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000209509 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTGACTG TTACGACCGC CAACGTCAAC GGGATTCGAG CCGCGGCCCG CAAGGGGTTC 
GTGGAATGGC TGAGCGACAC CACCGCTGAC GTGGTGTGTC TGCAGGAGGT GCGCGCCACC
GACGAACAGG TGCCCGTCGA GGTGCGCGAC GTCGACGGCT GGCACATGAT CGTGGCCCCG
GCCGCCGACA AGGGCCGCGC CGGAGTGGCC GTGCTCAGTC GCGAGACCCC GGCGCGCGTG
CAGGTGGGGT TCGGTTCGGA GGAGTTCGAC GTGTCGGGCC GGTACCTGGA GGTCGACCTG
CCCGGTGTGA CCGTGGCCAG CCTGTACCTG CCCTCGGGTG AGACCGGCAC GCCCCGCCAG
GACCAGAAGG AACGGTTCAT GGCCGAGTTC GCCGAGTACC TGGTCGCGTT GCGTAAACGC
GCCGAGGCCG ACAACCGTCA CGTCGTCATC TGCGGCGACT GGAACATCGC CCACCAGGAA
ATCGACCTGA AGAACTGGAA GGCGAACAAG AAGACCGCCG GGTTCCTGCC CGAGGAACGC
GAATGGATGA CCCGCGTGTT CGACGACATC GGGTACGTCG ATGTGGCGCG TCGCCTGCAC
CCTGAGGGGC CGGGCCCGTA TTCGTGGTGG TCGTACCGTG GCCGCGCCTT CGACAACGAC
GCAGGCTGGC GCATCGACTA CCACATCGCC ACCCCGGGCC TGGCCGAGGC GGCTAAGACC
GCGGTGGTGG AACGCGCCGC CACACACGAC GCGCGCTGGT CGGACCACGC GCCCGTCACC
GTCACCTACG CGGTGTAG
 
Protein sequence
MLTVTTANVN GIRAAARKGF VEWLSDTTAD VVCLQEVRAT DEQVPVEVRD VDGWHMIVAP 
AADKGRAGVA VLSRETPARV QVGFGSEEFD VSGRYLEVDL PGVTVASLYL PSGETGTPRQ
DQKERFMAEF AEYLVALRKR AEADNRHVVI CGDWNIAHQE IDLKNWKANK KTAGFLPEER
EWMTRVFDDI GYVDVARRLH PEGPGPYSWW SYRGRAFDND AGWRIDYHIA TPGLAEAAKT
AVVERAATHD ARWSDHAPVT VTYAV