Gene Snas_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3204 
Symbol 
ID8884403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3384176 
End bp3384838 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511967 
Protein GI291300689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.20809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000140296 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCCAATC TGGTAGAGGA AACAGCGCTG TTGGCGTACC GCGACGACAC CGGACGCAAC 
GCCGTCCAGC ACCTGGAACT CGGGCTGGCC GGAGCCGCCC TTTTGGAACT GACACTGGCC
GGACGCATCG ACGTCGACAC CTCAGGGCGC GTCGTCGTCC TCAACCCCGG CCCCACCGGG
CACCCCGTCA CCGACACCTG CCTGGCCCGT ATCAGCGCCG ACAAACCCCG CAAAGCCAAA
TCCTGGGTGC AGAAACTGTC CCGCGGCCTG AAGAACCAGG TCCTTGAAAC CCTCGTCGAC
CAGCACATCC TCACCCACCA CCGCGACGCC GTACTGGGGT TCATCCCCTT CAACCGGTAC
CGGCCCGCCG ACGCCCGCGT CGAAGCCGAC ATCCGTTCCC GCCTCGAACA AGCCGTCACC
CACCGCGTCG GCATCGACGA ACGCACCGCG GCACTGGCCG GACTCGTGTA CGCCACCCAG
ATGGAAAAGA TCGCCCTGCC CGGCCACAAA CGCCGCGAAG CCCGCAAAAC CCTCAAAGAG
ATCAGCGAAA CCTCCTGGGC CACCACCGCC ACCAAGAAAG CCATCCAAGC CGCCCAAGCA
GCCGTCACCG CGTCCATCGC CGCGGCGGCC TCGGCCGGAG CCGCCTCCGG CGGCAGCAGC
TGA
 
Protein sequence
MANLVEETAL LAYRDDTGRN AVQHLELGLA GAALLELTLA GRIDVDTSGR VVVLNPGPTG 
HPVTDTCLAR ISADKPRKAK SWVQKLSRGL KNQVLETLVD QHILTHHRDA VLGFIPFNRY
RPADARVEAD IRSRLEQAVT HRVGIDERTA ALAGLVYATQ MEKIALPGHK RREARKTLKE
ISETSWATTA TKKAIQAAQA AVTASIAAAA SAGAASGGSS