Gene Snas_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3197 
Symbol 
ID8884396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3377399 
End bp3378385 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003511960 
Protein GI291300682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000643204 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000002362 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTCATC GGGCCGCGGC GACTTTCCGG TTTGTGGGGG TGCGGTTGGG TGGTGCGGCG 
GTGTCGTTGT TGTTGGTGTT GGTGAGCGCG TTTTTCATTT TCCGGGTGTT GGGTGGGGAT
CCGGTGACGG CGATGACGCG GGATTCGCCG GCGACGCCGG AGCAGAAGGC GGCGCTCAGG
CGTGAGTTGG GTTTGGACAA GGGGTTGGGG GCGCAGTTTG TTGATTATGT GCGGGAGATG
TTGTCGGGGC GGTTGGGGGT GTCGTATCAG TCGCGGTCGC CGGTGGTGGA GGTGATTTGG
GAGCGGTTGC CGGCGACGGT GTTGTTGACG GGTACGGCGT TGGTGTTGGC GTCGGGTGTG
GGGTTGTGGA TTGGTTCGCG GGCGGGGTGG CGGGCGGGGT CGCGGTTCGA TCGGGTGCAT
GTGGGGGTGT CGTTGACGTT GTGGTCGGCG CCGACGTTTT GGTTGGGGTT GGTGTCGGTG
ATGGTGTTTG GTCGGTTGTT GGGGTGGTTT CCGGTTAATG GGATGCGGTC GGCGCGGGGG
TCGGATGGGT GGCTGGCTGA GGTGGTGGAT GTGGCGCATC ATCTGGTGTT GCCGGCGGTG
ACGATGGCGG CGGTGATTTA CGCGCAGTAT GTGTTGGTCA TGCGTTCGTC GATTATGGAG
GAGAAGAGTG CGGATTATGT GTTGACGGCG CGGGCGAAGG GTTTGCGGGA TGAGGTGGTG
CGTCGTCGGC ATGCGGTGCC GAATGCGTTG TTGCCGACGG TGACGTTGGT GTTTTTGCAG
TTGGGTGGGG TTGTGGGTGG GGCGGTGTTG ACGGAGACGG TGTTTAGTTG GCCGGGGTTG
GGGTTGTTGA CGTATCAGGC GTTGAAGATT CCGGATATTC CGTTGTTGCA GGGGACGTTC
GTGTTCTTTT CGGCGGCGGT GATTGTGGCC AATACGTTGG CCGACATCGT GTATCGGATG
CTTGATCCTC GGGTGCGTGT GTCGTGA
 
Protein sequence
MSHRAAATFR FVGVRLGGAA VSLLLVLVSA FFIFRVLGGD PVTAMTRDSP ATPEQKAALR 
RELGLDKGLG AQFVDYVREM LSGRLGVSYQ SRSPVVEVIW ERLPATVLLT GTALVLASGV
GLWIGSRAGW RAGSRFDRVH VGVSLTLWSA PTFWLGLVSV MVFGRLLGWF PVNGMRSARG
SDGWLAEVVD VAHHLVLPAV TMAAVIYAQY VLVMRSSIME EKSADYVLTA RAKGLRDEVV
RRRHAVPNAL LPTVTLVFLQ LGGVVGGAVL TETVFSWPGL GLLTYQALKI PDIPLLQGTF
VFFSAAVIVA NTLADIVYRM LDPRVRVS