| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3178 |
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| Symbol | |
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| ID | 8884377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3358762 |
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| End bp | 3360270 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003511942 |
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| Protein GI | 291300664 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000963226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000995055 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCCC CCACCCGCTC CGTCGTCGAC GACGCCCTGG CCGCCGACCG ACTCGGCGCA
CCCTCCATCA TCGCCTTCGC GATGACCGCC GCCGCCCCCC TGATGACCAT CGGCGGCGTT
GTCACCGTCG GCTGGGCCAC CGTCTCAGCC GACACCGGCA TCACCGGCTA CCCCCTGGCA
TTCCTGCTCA TGGCAGCCGT CCTCGGCCTG TTCTCCATCG GCTACATGGC CATGTCCAGG
CGCATCAACA ACACCGGCGC CTTCTACTCC TACGTCGCCC AAGGAGCCGG AAAACCCGCC
GGAGTCGCCG CCGCCTTCAC CGCCTTCACC GCGTACAACA TGATGCAAGT CGGCCTGTAC
GGCATCTTCG GCGCCACCAT GCAAGCCTTC ATCACCAACA AAACCGGCCT GGCCATCGAC
TGGTGGATCT ACGCCATCAC CGCGTGGGCC ATCGTCGCGC TCCTGGGTGT CCTACGCGTC
GACATCAACG GCACCGTCCT TTTGGTCATC GTCGCCGCCG AAGTCGCCGT CGTCATCATC
TTCGACACCG TTTTCCTCGC CAACCCCGCC GGCGGCACCA TCAGCCTTTC CACCTTCGCC
CCCGACAACC TGTTCCTGCC CGGCATCGGC GCCGTGGCCG TCACCATCTT CACCGCCTTC
GTCGGCTTCG AAGCCGCCGC GGTCTACTCC GAGGAAAGCC GCGACCGCAC CCGCACCGTC
CCCGTCGCCA CCTACCTCGC CCTGGGCCTC ATGGTCATCT TCTACGCCGC CACCGCCTGG
GCCATCGCCG TGACCGTCGG CGACGACAAA CTCATCACCA CCGCCGCCAC CCAACAATCC
GAGATGATGT TCACCGTCGC CGCCGAAAGA CTCGGCACCT CCACCGTGTC CGACATCGGC
ATCATCCTGC TCATCACCAG CGTCTTCGCC GCCATGCTGT CCTACCACAA CACCGTCGCC
CGCTACACCT ACGCGCTGGC CCGCGAACAC GTCCTGCCCA CCCGCCTCGC CCGCACCGGC
ATGCGCTCCG GCGCCCCCAA AAACGCCTCC ATCCTGCAAA GCATCATCGG CATCACCGTC
ATCGCCGGCT TCGCCATCGC CGGCGGCGAC CCCCTGGTGC AACTGTTCTT CGTCACCGGC
ATGACCGGCG GCTTCGGCGT CCTTTTGCTC GTCACCGCCA CCGCCATCGC CGTGGTGTGC
TTCTTCGCCA AAAACGGCGG CACCGAGAAC ATCATCACCC GCTACCTCGC GCCCGGAGCC
GCCGCGGCCA TCCTCGTGGC CATCGTCTAC GCCGCCATCG AAGCCTTCCC CAGCCTCATC
GGCTGGAAAC CCACCCAACC CTGGTGGATC TTCCCCGCCG CCTTCGCCCT CATCGCCGCC
CTCGGCGTGA CCTGGGCCCT CATCCTCAAA ACCACCCGAC CCGGCTCCTA CCAACGCATC
GGCGCCGCCA ACACCCCCAC CCCACCCCCA CACCACGACA GCCCCGTCCT GACAGGAGAC
CGCGCATGA
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| Protein sequence | MSAPTRSVVD DALAADRLGA PSIIAFAMTA AAPLMTIGGV VTVGWATVSA DTGITGYPLA
FLLMAAVLGL FSIGYMAMSR RINNTGAFYS YVAQGAGKPA GVAAAFTAFT AYNMMQVGLY
GIFGATMQAF ITNKTGLAID WWIYAITAWA IVALLGVLRV DINGTVLLVI VAAEVAVVII
FDTVFLANPA GGTISLSTFA PDNLFLPGIG AVAVTIFTAF VGFEAAAVYS EESRDRTRTV
PVATYLALGL MVIFYAATAW AIAVTVGDDK LITTAATQQS EMMFTVAAER LGTSTVSDIG
IILLITSVFA AMLSYHNTVA RYTYALAREH VLPTRLARTG MRSGAPKNAS ILQSIIGITV
IAGFAIAGGD PLVQLFFVTG MTGGFGVLLL VTATAIAVVC FFAKNGGTEN IITRYLAPGA
AAAILVAIVY AAIEAFPSLI GWKPTQPWWI FPAAFALIAA LGVTWALILK TTRPGSYQRI
GAANTPTPPP HHDSPVLTGD RA
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