Gene Snas_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3172 
Symbol 
ID8884371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3353770 
End bp3354543 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003511936 
Protein GI291300658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0232436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000099783 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCCCCG ACGAAGTCCT CCTCCAGGCC GAATCCCATC GGCGGGTGGT GCGCGTCGGC 
GACACCGTCC GCAGGCCCGT CCAGCCCTGG ACACCCGCCA TCCACGCCCT CCTGGACCAC
CTGGAGGCCA TCGGCTTCGT CCCCGCTCCC CGAGCCCGGG GCATCGACGA CCAGGGACGC
GAGATCCTGA CCTACATCCC CGGCGAATCC GGACCCGACG GCTGGGCCAA AGTCGTCACC
GACTCCGGCC TGAGCGCCTT CGCCGCCCTG CTGCGCGACT ACCACGACGC CATCGCCGAC
TACACCCCCA CCGCGGGGAC CGTGTGGGCC ACCGGAGCGG GCTCCCCCAG CCCGGGCGAG
GTCATCTGCC ACGGCGACTT CGGACCCTGG AACGTCGTAT GGCAGGGCGA CAAACCGGTG
GGCATCATCG ACTGGGACTT CGCCCACCCC GCGCCCCGAC GCCACGACGT CGCCTACGCA
CTGGAGTTCG TCACCCCGTT TCGCGACGAC GCCGAAGCCC ACACCGCCAT GTCCCACACC
CACCCGCCTA ACCGGCGCCG CCGACTGGAA CGGTTCTGCC GCTCCTACGG ACTGACCTCC
ACCGAGGGCA TGGTCGACGC GGTCATCACC GCGCAGCGCG ACACCGCCGA ACTGGTGCGC
GCGCTGGCCG CCGACGGGCA CGAACCGCAG GCCACCTGGG CGTCACAGGG GTACGTGCGC
GAACTCGAAC AACGCATCGA ATGGACCCGC CGCCACCGGC ACCTGTTCGC CTAG
 
Protein sequence
MAPDEVLLQA ESHRRVVRVG DTVRRPVQPW TPAIHALLDH LEAIGFVPAP RARGIDDQGR 
EILTYIPGES GPDGWAKVVT DSGLSAFAAL LRDYHDAIAD YTPTAGTVWA TGAGSPSPGE
VICHGDFGPW NVVWQGDKPV GIIDWDFAHP APRRHDVAYA LEFVTPFRDD AEAHTAMSHT
HPPNRRRRLE RFCRSYGLTS TEGMVDAVIT AQRDTAELVR ALAADGHEPQ ATWASQGYVR
ELEQRIEWTR RHRHLFA