Gene Snas_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3149 
Symbol 
ID8884348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3325607 
End bp3326167 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content69% 
IMG OID 
ProductUracil phosphoribosyltransferase 
Protein accessionYP_003511913 
Protein GI291300635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000464332 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTCAGC GTGCCCGCGA TCCCGGTAAA CGACCCCTTT TGTCCAGTGC GGACATCGCA 
CGCATCATCG ATCGCATCGC CCACCAGATC CTCGAGAAGA CCGGTGGCGA CGACAACACG
GTCCTGTTGG GAATCCCCAC GCGCGGCGTT CCGCTGGCGC GCCGACTGGC CGAACGCATC
AAGACCTTCG AGGGCCTCGA CGTCCCGCAC GGCAGCCTCG ACGTCACCCT CTACCGCGAC
GACCTGCGGA TGCGCGGTGC CCGGGCGCTC GGCCCCACCG ACATCCCCGC CTCGGGCGTC
GACGACAAAC GCGTCATCCT CGTCGACGAC GTCCTGTACT CCGGCCGCAC CGTGCGTGCC
GCCCTCAACG GCCTGTACGA CCTGGGCCGT CCCGCCTGGG TGCAGCTGGC CGTCCTGGTC
GACAGGGGAC ACCGGCGGCT GCCGATCCGC GCCGACTACG TCGGCAAGAA CCTGCCCACC
GCGATCGCCG ACTCGGTGTC GGTGCTGGTA TCCGAAATGG ACGGCGAGGA CGCCGTGTAC
GTCGACAGGG AGGAACAGTG A
 
Protein sequence
MAQRARDPGK RPLLSSADIA RIIDRIAHQI LEKTGGDDNT VLLGIPTRGV PLARRLAERI 
KTFEGLDVPH GSLDVTLYRD DLRMRGARAL GPTDIPASGV DDKRVILVDD VLYSGRTVRA
ALNGLYDLGR PAWVQLAVLV DRGHRRLPIR ADYVGKNLPT AIADSVSVLV SEMDGEDAVY
VDREEQ