Gene Snas_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3124 
Symbol 
ID8884323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3298631 
End bp3299716 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511888 
Protein GI291300610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.507339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000432102 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGGGAAT CGGCATACGG ACAGTTCGGC TCGAGCCTGC GGGACCTGCC CAGGCTGCGC 
AACTCACGAC GGGGCCGGGC GTCGAGCTGG GACACCACCG GCGGCAACGA CGACCGGGTC
ACCGTGGAGC CGGGCGAGAC GGTGACGCTG GCCGACCTGC GCGGCCCCGG GGCGATCACC
CACATCTGGT GCACCACGAT GCTGGAGACT CCGGACGGAC CCTGGGCGGT CGAGACCGAC
TTCCTGCGGC GCCTGGTCCT CAAGATCACC TGGGACGACG CCGACCACCC CAGCGTCCTG
GTGCCGCTGG GGGACTTCTT CGGCGTCGGA CACGGCCGCA CCGCGAACTT CTCCTCGGCG
CCACTGCAGA TGAGTCCACA GGACGGCAAG GGCTTCAACA GCTGGTTCGC CATGCCCTAC
GCGCAGGGTG CCAAAGTCGA GCTCATCAGC GAACTGGAGC AACAGAAGGT CTTCTTCTAC
TACTACGTCG ACTACGAGTC GTACGCCCGC GCTGAGGACG ACCTGGGCTA CTTCCACGCC
CAGTGGCACC GCGAGAACCC CACCGACGGA CAGCCGCGCG GCGAGTCCAC CGTGCCGCAG
CACCTGTTCG AGGGCCCCAA CCTGACCGGC GAGGGCAACT ACGTGATCCT GGACGCGACC
GGCCGCGGCC ACTACGTCGG CTGTGTGTTC AACGTGCACA ACCTGTCCGA CAGCACCGAC
TGGGACTGGT ACGGCGAGGG CGACGACATG ATCTTCATCG ACGGCGAACC CTGGCCGCCG
AGGCTGCACG GCACCGGAAC CGAGGACTAC TTCAACACCT CCTGGTGCCC GACCCAGACC
TACCACGCCC CGTACCACGG CATCACGCTG CCGGGCCGCG ACAACTGGAA GGGCCAGATC
TCGATGTACC GGTTCCACAT CGAGGATCCG GTGCTGTTCA ACGAGTCCAT CAAGGTCACC
ATCGAGCACG GCCACGCCAA CAAACGCTGT GACGACATCT CCTCGGTGGC GTACTGGTAC
CAGACGCTGC CGCACCGGCC GTTCGACCTG GCACCCGTCG CGCAACGGCT GCCGCGCTCG
GAGTGA
 
Protein sequence
MRESAYGQFG SSLRDLPRLR NSRRGRASSW DTTGGNDDRV TVEPGETVTL ADLRGPGAIT 
HIWCTTMLET PDGPWAVETD FLRRLVLKIT WDDADHPSVL VPLGDFFGVG HGRTANFSSA
PLQMSPQDGK GFNSWFAMPY AQGAKVELIS ELEQQKVFFY YYVDYESYAR AEDDLGYFHA
QWHRENPTDG QPRGESTVPQ HLFEGPNLTG EGNYVILDAT GRGHYVGCVF NVHNLSDSTD
WDWYGEGDDM IFIDGEPWPP RLHGTGTEDY FNTSWCPTQT YHAPYHGITL PGRDNWKGQI
SMYRFHIEDP VLFNESIKVT IEHGHANKRC DDISSVAYWY QTLPHRPFDL APVAQRLPRS
E